Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC092159.4-201ENST00000624944 550 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
PRKDCP78527 AL365400.1-201ENST00000431854 640 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 GTF2IP9-201ENST00000502460 301 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.26□□□□□ -2.21
PRKDCP78527 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.26□□□□□ -2.21
PRKDCP78527 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
PRKDCP78527 AP001486.2-201ENST00000561652 5113 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PRKDCP78527 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 MAPK10-266ENST00000641066 6555 ntBASIC1.26□□□□□ -2.21
PRKDCP78527 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRKDCP78527 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.25□□□□□ -2.21
PRKDCP78527 AC098583.1-201ENST00000480875 255 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC092989.1-201ENST00000481235 277 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.25□□□□□ -2.21
PRKDCP78527 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.25□□□□□ -2.21
PRKDCP78527 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRKDCP78527 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRKDCP78527 RNU6-1032P-201ENST00000384100 107 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 DNAJC19P6-201ENST00000401853 280 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AL121972.1-201ENST00000402023 252 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.25□□□□□ -2.21
PRKDCP78527 PAICSP7-201ENST00000419829 962 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.25□□□□□ -2.21
PRKDCP78527 AC107393.1-201ENST00000512403 346 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC103810.1-201ENST00000579873 453 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.25□□□□□ -2.21
PRKDCP78527 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
PRKDCP78527 AC135999.1-201ENST00000478962 479 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 SNORA25.15-201ENST00000516487 89 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.25□□□□□ -2.21
PRKDCP78527 MIR4506-201ENST00000584693 77 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.25□□□□□ -2.21
PRKDCP78527 AL391646.1-201ENST00000603860 190 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AL159169.2-201ENST00000610061 1269 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRKDCP78527 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRKDCP78527 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRKDCP78527 RNU6-984P-201ENST00000363236 109 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 RPL23AP39-201ENST00000415533 405 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 RPL39P40-201ENST00000445481 146 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC107015.1-201ENST00000466902 747 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.25□□□□□ -2.21
PRKDCP78527 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.25□□□□□ -2.21
PRKDCP78527 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC010329.2-201ENST00000595195 2737 ntBASIC1.25□□□□□ -2.21
PRKDCP78527 AC091152.2-201ENST00000591628 2569 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 AL035405.1-201ENST00000400795 710 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.24□□□□□ -2.21
PRKDCP78527 AC244033.1-201ENST00000426826 870 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 USP9YP10-201ENST00000454868 628 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.24□□□□□ -2.21
PRKDCP78527 AC009452.1-201ENST00000640823 606 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.24□□□□□ -2.21
PRKDCP78527 PTP4A1P1-201ENST00000420539 515 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.24□□□□□ -2.21
PRKDCP78527 AC096992.1-201ENST00000459808 709 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.24□□□□□ -2.21
PRKDCP78527 AC090071.1-201ENST00000507713 644 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 RNU6-1334P-201ENST00000516032 105 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 AC022790.1-201ENST00000522872 204 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.24□□□□□ -2.21
PRKDCP78527 AC023043.3-201ENST00000593113 385 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 VIS1.1-201ENST00000610517 203 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
PRKDCP78527 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.24□□□□□ -2.21
PRKDCP78527 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PRKDCP78527 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.24□□□□□ -2.21
PRKDCP78527 AL138785.1-201ENST00000425821 331 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 RPS6P12-201ENST00000432491 726 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.24□□□□□ -2.21
PRKDCP78527 AC011979.1-201ENST00000472300 483 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PRKDCP78527 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.24□□□□□ -2.21
PRKDCP78527 GLYCAM1-201ENST00000546596 285 ntBASIC1.24□□□□□ -2.21
PRKDCP78527 AP001148.1-201ENST00000624124 2359 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 Y_RNA.68-201ENST00000362881 102 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 RNU1-42P-201ENST00000364033 160 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 RNU6-516P-201ENST00000411381 104 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 ATP5F1P1-201ENST00000433775 569 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AC079804.2-201ENST00000490376 200 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 SNORD53B-201ENST00000577887 78 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AC016727.2-201ENST00000603988 621 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AC010678.1-201ENST00000614118 713 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AP000553.5-201ENST00000641933 54 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
PRKDCP78527 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.23□□□□□ -2.21
PRKDCP78527 RWDD4P2-201ENST00000426392 563 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 BNIP3P2-201ENST00000441221 577 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.23□□□□□ -2.21
PRKDCP78527 RWDD4P1-201ENST00000488019 565 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 MTCYBP37-201ENST00000510642 1133 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.23□□□□□ -2.21
PRKDCP78527 AC109446.2-201ENST00000567872 497 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 MIR98-201ENST00000606724 119 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 RNA5SP295-201ENST00000362655 121 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 RNA5SP139-201ENST00000364340 117 ntBASIC1.23□□□□□ -2.21
PRKDCP78527 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms