Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR98-201ENST00000606724 119 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH12P55289 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH12P55289 AL161734.1-201ENST00000609720 557 ntBASIC3.64□□□□□ -1.83
CDH12P55289 MIR6868-201ENST00000611215 58 ntBASIC3.64□□□□□ -1.83
CDH12P55289 MIR6820-201ENST00000611508 62 ntBASIC3.64□□□□□ -1.83
CDH12P55289 U73479.1-201ENST00000618062 168 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AL445567.2-201ENST00000618935 498 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC073534.2-201ENST00000620377 381 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC091905.1-201ENST00000624400 311 ntBASIC3.64□□□□□ -1.83
CDH12P55289 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 RNU6-181P-201ENST00000363225 107 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RNU6-1249P-201ENST00000363237 111 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RNA5SP399-201ENST00000364003 117 ntBASIC3.63□□□□□ -1.83
CDH12P55289 Y_RNA.248-201ENST00000364501 109 ntBASIC3.63□□□□□ -1.83
CDH12P55289 Y_RNA.372-201ENST00000365599 102 ntBASIC3.63□□□□□ -1.83
CDH12P55289 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 RNU6-1103P-201ENST00000384150 107 ntBASIC3.63□□□□□ -1.83
CDH12P55289 MTCO3P40-201ENST00000392516 676 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AL583834.1-201ENST00000406943 343 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RNA5SP239-201ENST00000410218 129 ntBASIC3.63□□□□□ -1.83
CDH12P55289 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH12P55289 USP9YP18-201ENST00000425912 695 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AC133104.1-201ENST00000429100 218 ntBASIC3.63□□□□□ -1.83
CDH12P55289 MRPS10P2-201ENST00000431226 381 ntBASIC3.63□□□□□ -1.83
CDH12P55289 OR4K11P-201ENST00000431829 904 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AL139415.2-201ENST00000431968 163 ntBASIC3.63□□□□□ -1.83
CDH12P55289 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH12P55289 MTND4LP10-201ENST00000435146 291 ntBASIC3.63□□□□□ -1.83
CDH12P55289 TIMM9P1-201ENST00000436122 256 ntBASIC3.63□□□□□ -1.83
CDH12P55289 MTCO2P3-201ENST00000442543 421 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RPL21P89-201ENST00000444021 467 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RANP8-201ENST00000444720 713 ntBASIC3.63□□□□□ -1.83
CDH12P55289 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AC132479.1-201ENST00000449160 144 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RPS11P1-201ENST00000451072 473 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AC013267.1-201ENST00000458227 267 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AL121769.1-201ENST00000469473 401 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RN7SL860P-201ENST00000473738 223 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AC106872.2-201ENST00000494303 480 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH12P55289 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH12P55289 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH12P55289 SAP18P1-201ENST00000512058 390 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RNU6-445P-201ENST00000516949 107 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RNU6-1220P-201ENST00000517126 108 ntBASIC3.63□□□□□ -1.83
CDH12P55289 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH12P55289 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH12P55289 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH12P55289 OR4T1P-201ENST00000554933 911 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AL845331.3-202ENST00000562856 261 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH12P55289 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH12P55289 AC110741.2-201ENST00000605278 268 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AC090970.3-201ENST00000612566 866 ntBASIC3.63□□□□□ -1.83
CDH12P55289 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 AL359880.1-201ENST00000621879 266 ntBASIC3.63□□□□□ -1.83
CDH12P55289 AL138713.1-201ENST00000624026 2130 ntBASIC3.63□□□□□ -1.83
CDH12P55289 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 ELF2P3-201ENST00000445099 1506 ntBASIC3.63□□□□□ -1.83
CDH12P55289 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH12P55289 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH12P55289 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH12P55289 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH12P55289 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH12P55289 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH12P55289 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 RNU6-1283P-201ENST00000365314 105 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDH12P55289 RNU6-780P-201ENST00000391030 104 ntBASIC3.62□□□□□ -1.83
CDH12P55289 HLFP1-201ENST00000402375 499 ntBASIC3.62□□□□□ -1.83
CDH12P55289 BTF3P7-201ENST00000407097 488 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AMD1P2-201ENST00000412936 992 ntBASIC3.62□□□□□ -1.83
CDH12P55289 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH12P55289 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 RPS15AP12-201ENST00000419498 388 ntBASIC3.62□□□□□ -1.83
CDH12P55289 OR1AA1P-201ENST00000419597 916 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH12P55289 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 FCF1P1-201ENST00000432690 571 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms