Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC109583.1-201ENST00000432156 268 ntBASIC3.92□□□□□ -1.78
PMS2P54278 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.92□□□□□ -1.78
PMS2P54278 DNAJC19P4-201ENST00000440115 345 ntBASIC3.92□□□□□ -1.78
PMS2P54278 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.92□□□□□ -1.78
PMS2P54278 HMGB3P8-201ENST00000449709 577 ntBASIC3.92□□□□□ -1.78
PMS2P54278 OR9M1P-201ENST00000459641 921 ntBASIC3.92□□□□□ -1.78
PMS2P54278 RPL31P50-201ENST00000471002 296 ntBASIC3.92□□□□□ -1.78
PMS2P54278 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PMS2P54278 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PMS2P54278 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.92□□□□□ -1.78
PMS2P54278 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.92□□□□□ -1.78
PMS2P54278 RNA5SP179-201ENST00000517284 121 ntBASIC3.92□□□□□ -1.78
PMS2P54278 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
PMS2P54278 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.92□□□□□ -1.78
PMS2P54278 OR5G4P-201ENST00000525251 760 ntBASIC3.92□□□□□ -1.78
PMS2P54278 AP003392.2-201ENST00000527269 208 ntBASIC3.92□□□□□ -1.78
PMS2P54278 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PMS2P54278 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.92□□□□□ -1.78
PMS2P54278 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.92□□□□□ -1.78
PMS2P54278 AC010928.3-201ENST00000587712 541 ntBASIC3.92□□□□□ -1.78
PMS2P54278 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.92□□□□□ -1.78
PMS2P54278 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.92□□□□□ -1.78
PMS2P54278 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PMS2P54278 AC013476.2-201ENST00000614456 459 ntBASIC3.92□□□□□ -1.78
PMS2P54278 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.92□□□□□ -1.78
PMS2P54278 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.92□□□□□ -1.78
PMS2P54278 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.92□□□□□ -1.78
PMS2P54278 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PMS2P54278 AC093591.3-201ENST00000634516 308 ntBASIC3.92□□□□□ -1.78
PMS2P54278 AC068137.3-201ENST00000639191 341 ntBASIC3.92□□□□□ -1.78
PMS2P54278 AC073869.6-201ENST00000640656 341 ntBASIC3.92□□□□□ -1.78
PMS2P54278 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PMS2P54278 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PMS2P54278 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PMS2P54278 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PMS2P54278 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.92□□□□□ -1.78
PMS2P54278 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.92□□□□□ -1.78
PMS2P54278 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
PMS2P54278 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.91□□□□□ -1.78
PMS2P54278 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 SNORA31-201ENST00000362607 130 ntBASIC3.91□□□□□ -1.78
PMS2P54278 RNU6-335P-201ENST00000364563 113 ntBASIC3.91□□□□□ -1.78
PMS2P54278 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PMS2P54278 AL031679.1-201ENST00000400616 525 ntBASIC3.91□□□□□ -1.78
PMS2P54278 DHFRP6-201ENST00000401776 268 ntBASIC3.91□□□□□ -1.78
PMS2P54278 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.91□□□□□ -1.78
PMS2P54278 RNU6-248P-201ENST00000410720 107 ntBASIC3.91□□□□□ -1.78
PMS2P54278 AC109780.2-201ENST00000413467 845 ntBASIC3.91□□□□□ -1.78
PMS2P54278 MTCO2P5-201ENST00000422621 426 ntBASIC3.91□□□□□ -1.78
PMS2P54278 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.91□□□□□ -1.78
PMS2P54278 MTND5P14-201ENST00000441481 1267 ntBASIC3.91□□□□□ -1.78
PMS2P54278 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.91□□□□□ -1.78
PMS2P54278 AC078785.3-201ENST00000476607 425 ntBASIC3.91□□□□□ -1.78
PMS2P54278 LARP1BP2-201ENST00000486594 519 ntBASIC3.91□□□□□ -1.78
PMS2P54278 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS2P54278 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS2P54278 AC022447.3-201ENST00000506865 495 ntBASIC3.91□□□□□ -1.78
PMS2P54278 RNU6-27P-201ENST00000516146 107 ntBASIC3.91□□□□□ -1.78
PMS2P54278 AC008489.1-201ENST00000524271 483 ntBASIC3.91□□□□□ -1.78
PMS2P54278 OR4P1P-201ENST00000530808 1136 ntBASIC3.91□□□□□ -1.78
PMS2P54278 YPEL5P3-201ENST00000547227 352 ntBASIC3.91□□□□□ -1.78
PMS2P54278 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS2P54278 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS2P54278 MIR4738-201ENST00000579134 87 ntBASIC3.91□□□□□ -1.78
PMS2P54278 MIR4307-201ENST00000582802 84 ntBASIC3.91□□□□□ -1.78
PMS2P54278 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.91□□□□□ -1.78
PMS2P54278 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.91□□□□□ -1.78
PMS2P54278 SNRPGP15-201ENST00000600149 222 ntBASIC3.91□□□□□ -1.78
PMS2P54278 AC109347.2-201ENST00000610220 349 ntBASIC3.91□□□□□ -1.78
PMS2P54278 U6.98-201ENST00000637157 84 ntBASIC3.91□□□□□ -1.78
PMS2P54278 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.91□□□□□ -1.78
PMS2P54278 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
PMS2P54278 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.91□□□□□ -1.78
PMS2P54278 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PMS2P54278 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PMS2P54278 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PMS2P54278 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PMS2P54278 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.9□□□□□ -1.78
PMS2P54278 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.9□□□□□ -1.78
PMS2P54278 AL157700.1-201ENST00000561973 1432 ntBASIC3.9□□□□□ -1.78
PMS2P54278 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PMS2P54278 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PMS2P54278 RNA5SP258-201ENST00000362750 119 ntBASIC3.9□□□□□ -1.79
PMS2P54278 RNU6-1249P-201ENST00000363237 111 ntBASIC3.9□□□□□ -1.79
PMS2P54278 RNU5F-7P-201ENST00000363696 115 ntBASIC3.9□□□□□ -1.79
PMS2P54278 RNU6-283P-201ENST00000364788 107 ntBASIC3.9□□□□□ -1.79
PMS2P54278 SNORD51-201ENST00000384320 80 ntBASIC3.9□□□□□ -1.79
PMS2P54278 MIR199A2-201ENST00000385289 110 ntBASIC3.9□□□□□ -1.79
PMS2P54278 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PMS2P54278 RNU6-952P-201ENST00000391164 108 ntBASIC3.9□□□□□ -1.79
PMS2P54278 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PMS2P54278 AL583834.1-201ENST00000406943 343 ntBASIC3.9□□□□□ -1.79
PMS2P54278 HMGN1P14-201ENST00000412459 517 ntBASIC3.9□□□□□ -1.79
PMS2P54278 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms