Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MTND4LP10-201ENST00000435146 291 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.42□□□□□ -1.86
PDX1P52945 MTND1P30-201ENST00000441241 901 ntBASIC3.42□□□□□ -1.86
PDX1P52945 GDI2P2-201ENST00000445131 608 ntBASIC3.42□□□□□ -1.86
PDX1P52945 RPL36AP33-201ENST00000450395 310 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.42□□□□□ -1.86
PDX1P52945 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC099563.1-201ENST00000456086 418 ntBASIC3.42□□□□□ -1.86
PDX1P52945 snoU13.8-201ENST00000458890 104 ntBASIC3.42□□□□□ -1.86
PDX1P52945 SNORA59A-201ENST00000459326 152 ntBASIC3.42□□□□□ -1.86
PDX1P52945 RN7SL807P-201ENST00000470923 297 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC104563.1-201ENST00000476147 376 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AP001025.2-201ENST00000490908 477 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC078918.1-201ENST00000498515 228 ntBASIC3.42□□□□□ -1.86
PDX1P52945 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.42□□□□□ -1.86
PDX1P52945 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.42□□□□□ -1.86
PDX1P52945 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.42□□□□□ -1.86
PDX1P52945 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.42□□□□□ -1.86
PDX1P52945 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 MTCYBP41-201ENST00000528913 1123 ntBASIC3.42□□□□□ -1.86
PDX1P52945 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.42□□□□□ -1.86
PDX1P52945 AL121576.1-201ENST00000556055 276 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC009101.1-201ENST00000568135 242 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.42□□□□□ -1.86
PDX1P52945 AC090615.1-201ENST00000577519 154 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC006270.2-201ENST00000578523 652 ntBASIC3.42□□□□□ -1.86
PDX1P52945 PIGPP4-201ENST00000584447 307 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC010928.3-201ENST00000587712 541 ntBASIC3.42□□□□□ -1.86
PDX1P52945 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.42□□□□□ -1.86
PDX1P52945 AP000403.1-201ENST00000603349 851 ntBASIC3.42□□□□□ -1.86
PDX1P52945 AC105129.3-201ENST00000605455 485 ntBASIC3.42□□□□□ -1.86
PDX1P52945 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.42□□□□□ -1.86
PDX1P52945 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.42□□□□□ -1.86
PDX1P52945 AC138649.5-201ENST00000637456 137 ntBASIC3.42□□□□□ -1.86
PDX1P52945 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.42□□□□□ -1.86
PDX1P52945 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PDX1P52945 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 AC073073.2-201ENST00000609827 2578 ntBASIC3.42□□□□□ -1.86
PDX1P52945 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 AL161781.1-201ENST00000354277 403 ntBASIC3.41□□□□□ -1.86
PDX1P52945 RNU6-283P-201ENST00000364788 107 ntBASIC3.41□□□□□ -1.86
PDX1P52945 MIR128-1-201ENST00000384921 82 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL356421.1-201ENST00000403255 413 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL391417.1-201ENST00000404100 426 ntBASIC3.41□□□□□ -1.86
PDX1P52945 MTCO1P17-201ENST00000411522 491 ntBASIC3.41□□□□□ -1.86
PDX1P52945 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.41□□□□□ -1.86
PDX1P52945 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.41□□□□□ -1.86
PDX1P52945 AL365338.1-201ENST00000422282 858 ntBASIC3.41□□□□□ -1.86
PDX1P52945 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 AC079780.1-201ENST00000428259 207 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AC244035.1-201ENST00000430042 390 ntBASIC3.41□□□□□ -1.86
PDX1P52945 MTND4P32-201ENST00000437189 1237 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL512286.1-201ENST00000439244 400 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.41□□□□□ -1.86
PDX1P52945 NPM1P49-201ENST00000448027 714 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AC010655.1-201ENST00000449336 292 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.41□□□□□ -1.86
PDX1P52945 AC104308.1-201ENST00000454621 333 ntBASIC3.41□□□□□ -1.86
PDX1P52945 SNRPGP5-201ENST00000456003 220 ntBASIC3.41□□□□□ -1.86
PDX1P52945 HMGB1P22-201ENST00000505315 124 ntBASIC3.41□□□□□ -1.86
PDX1P52945 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
PDX1P52945 AC022447.3-201ENST00000506865 495 ntBASIC3.41□□□□□ -1.86
PDX1P52945 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.41□□□□□ -1.86
PDX1P52945 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.41□□□□□ -1.86
PDX1P52945 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDX1P52945 AP003497.1-201ENST00000528472 562 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.41□□□□□ -1.86
PDX1P52945 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 PCMTD1P2-201ENST00000565017 355 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AC087481.2-201ENST00000565492 330 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.41□□□□□ -1.86
PDX1P52945 MIR4307-201ENST00000582802 84 ntBASIC3.41□□□□□ -1.86
PDX1P52945 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 UBE2L4-201ENST00000587688 464 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL590229.1-201ENST00000603497 542 ntBASIC3.41□□□□□ -1.86
PDX1P52945 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDX1P52945 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.41□□□□□ -1.86
PDX1P52945 MIR7112-201ENST00000616126 65 ntBASIC3.41□□□□□ -1.86
PDX1P52945 U7.8-201ENST00000619968 63 ntBASIC3.41□□□□□ -1.86
PDX1P52945 MIR8057-201ENST00000620957 69 ntBASIC3.41□□□□□ -1.86
PDX1P52945 U4.6-201ENST00000621618 127 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL353748.2-201ENST00000622148 471 ntBASIC3.41□□□□□ -1.86
PDX1P52945 AL158801.5-201ENST00000623123 465 ntBASIC3.41□□□□□ -1.86
PDX1P52945 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
PDX1P52945 RPS4XP5-202ENST00000449995 1334 ntBASIC3.41□□□□□ -1.86
PDX1P52945 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms