Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.38□□□□□ -1.55
USP11P51784 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.38□□□□□ -1.55
USP11P51784 Y_RNA.153-201ENST00000363615 91 ntBASIC5.38□□□□□ -1.55
USP11P51784 SNORD113-7-201ENST00000363762 77 ntBASIC5.38□□□□□ -1.55
USP11P51784 Y_RNA.212-201ENST00000364177 102 ntBASIC5.38□□□□□ -1.55
USP11P51784 RNVU1-6-201ENST00000364688 164 ntBASIC5.38□□□□□ -1.55
USP11P51784 UBBP2-201ENST00000376781 231 ntBASIC5.38□□□□□ -1.55
USP11P51784 RNU4-70P-201ENST00000384579 139 ntBASIC5.38□□□□□ -1.55
USP11P51784 U3.20-201ENST00000390909 217 ntBASIC5.38□□□□□ -1.55
USP11P51784 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 MIR298-201ENST00000401212 88 ntBASIC5.38□□□□□ -1.55
USP11P51784 AL591848.1-201ENST00000413092 322 ntBASIC5.38□□□□□ -1.55
USP11P51784 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.38□□□□□ -1.55
USP11P51784 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.38□□□□□ -1.55
USP11P51784 AC108734.1-201ENST00000439549 399 ntBASIC5.38□□□□□ -1.55
USP11P51784 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 TRBV26-201ENST00000456572 344 ntBASIC5.38□□□□□ -1.55
USP11P51784 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.38□□□□□ -1.55
USP11P51784 AC006967.1-201ENST00000467608 589 ntBASIC5.38□□□□□ -1.55
USP11P51784 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 FTH1P21-201ENST00000512179 511 ntBASIC5.38□□□□□ -1.55
USP11P51784 RNA5SP228-201ENST00000516232 133 ntBASIC5.38□□□□□ -1.55
USP11P51784 RNU6-388P-201ENST00000517012 105 ntBASIC5.38□□□□□ -1.55
USP11P51784 RNU6-389P-201ENST00000517048 105 ntBASIC5.38□□□□□ -1.55
USP11P51784 MTND4P7-201ENST00000523876 130 ntBASIC5.38□□□□□ -1.55
USP11P51784 HIGD1AP5-201ENST00000529959 259 ntBASIC5.38□□□□□ -1.55
USP11P51784 AP000763.2-201ENST00000540641 163 ntBASIC5.38□□□□□ -1.55
USP11P51784 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.38□□□□□ -1.55
USP11P51784 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.38□□□□□ -1.55
USP11P51784 AL110118.1-201ENST00000553543 400 ntBASIC5.38□□□□□ -1.55
USP11P51784 MTCO3P23-201ENST00000561363 289 ntBASIC5.38□□□□□ -1.55
USP11P51784 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.38□□□□□ -1.55
USP11P51784 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.38□□□□□ -1.55
USP11P51784 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.38□□□□□ -1.55
USP11P51784 MIR6780A-201ENST00000615089 68 ntBASIC5.38□□□□□ -1.55
USP11P51784 CYP3A51P-201ENST00000633513 256 ntBASIC5.38□□□□□ -1.55
USP11P51784 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP11P51784 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.38□□□□□ -1.55
USP11P51784 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
USP11P51784 AC009902.3-201ENST00000606235 2172 ntBASIC5.38□□□□□ -1.55
USP11P51784 AC000123.3-201ENST00000624029 4975 ntBASIC5.37□□□□□ -1.55
USP11P51784 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 U3.11-201ENST00000364476 212 ntBASIC5.37□□□□□ -1.55
USP11P51784 Y_RNA.364-201ENST00000365532 101 ntBASIC5.37□□□□□ -1.55
USP11P51784 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 DEFB109C-201ENST00000382575 264 ntBASIC5.37□□□□□ -1.55
USP11P51784 DEFB109B-201ENST00000382656 264 ntBASIC5.37□□□□□ -1.55
USP11P51784 Y_RNA.463-201ENST00000384271 102 ntBASIC5.37□□□□□ -1.55
USP11P51784 RNY1P14-201ENST00000384426 108 ntBASIC5.37□□□□□ -1.55
USP11P51784 MIR19A-201ENST00000384878 82 ntBASIC5.37□□□□□ -1.55
USP11P51784 RNU1-82P-201ENST00000390851 165 ntBASIC5.37□□□□□ -1.55
USP11P51784 AL359643.1-201ENST00000404109 423 ntBASIC5.37□□□□□ -1.55
USP11P51784 AP000580.1-201ENST00000404439 358 ntBASIC5.37□□□□□ -1.55
USP11P51784 AL024474.1-201ENST00000404655 591 ntBASIC5.37□□□□□ -1.55
USP11P51784 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.37□□□□□ -1.55
USP11P51784 RN7SKP267-201ENST00000410381 285 ntBASIC5.37□□□□□ -1.55
USP11P51784 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.37□□□□□ -1.55
USP11P51784 H2AFZP5-201ENST00000446960 382 ntBASIC5.37□□□□□ -1.55
USP11P51784 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 AC079168.2-201ENST00000453977 416 ntBASIC5.37□□□□□ -1.55
USP11P51784 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 CEACAMP4-201ENST00000457676 421 ntBASIC5.37□□□□□ -1.55
USP11P51784 SNRPFP3-201ENST00000457792 225 ntBASIC5.37□□□□□ -1.55
USP11P51784 AL136126.1-201ENST00000473603 402 ntBASIC5.37□□□□□ -1.55
USP11P51784 AC020890.1-201ENST00000491837 504 ntBASIC5.37□□□□□ -1.55
USP11P51784 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.37□□□□□ -1.55
USP11P51784 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 MRPS35P2-201ENST00000508242 191 ntBASIC5.37□□□□□ -1.55
USP11P51784 HMGB1P41-201ENST00000520234 440 ntBASIC5.37□□□□□ -1.55
USP11P51784 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.37□□□□□ -1.55
USP11P51784 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.37□□□□□ -1.55
USP11P51784 RN7SL652P-201ENST00000577769 300 ntBASIC5.37□□□□□ -1.55
USP11P51784 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.37□□□□□ -1.55
USP11P51784 AC018889.1-201ENST00000605372 397 ntBASIC5.37□□□□□ -1.55
USP11P51784 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.37□□□□□ -1.55
USP11P51784 AC011155.2-201ENST00000623202 216 ntBASIC5.37□□□□□ -1.55
USP11P51784 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.37□□□□□ -1.55
USP11P51784 AL669831.3-213ENST00000636676 183 ntBASIC5.37□□□□□ -1.55
USP11P51784 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
USP11P51784 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
USP11P51784 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
USP11P51784 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.37□□□□□ -1.55
USP11P51784 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP11P51784 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 AL592182.3-201ENST00000642132 3304 ntBASIC5.36□□□□□ -1.55
USP11P51784 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 RNU5A-8P-201ENST00000364102 114 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms