Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.49□□□□□ -1.69
XPAP23025 RNU7-63P-201ENST00000459054 62 ntBASIC4.49□□□□□ -1.69
XPAP23025 AC006512.1-201ENST00000468816 291 ntBASIC4.49□□□□□ -1.69
XPAP23025 RN7SL810P-201ENST00000493031 276 ntBASIC4.49□□□□□ -1.69
XPAP23025 AC068305.1-201ENST00000497406 726 ntBASIC4.49□□□□□ -1.69
XPAP23025 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
XPAP23025 AC023141.12-201ENST00000512399 199 ntBASIC4.49□□□□□ -1.69
XPAP23025 AC103843.2-201ENST00000530523 682 ntBASIC4.49□□□□□ -1.69
XPAP23025 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.49□□□□□ -1.69
XPAP23025 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.49□□□□□ -1.69
XPAP23025 OR4K8P-201ENST00000578842 1048 ntBASIC4.49□□□□□ -1.69
XPAP23025 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.49□□□□□ -1.69
XPAP23025 MIR4719-201ENST00000585233 84 ntBASIC4.49□□□□□ -1.69
XPAP23025 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.49□□□□□ -1.69
XPAP23025 TUG1_1.1-201ENST00000610654 145 ntBASIC4.49□□□□□ -1.69
XPAP23025 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.49□□□□□ -1.69
XPAP23025 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.49□□□□□ -1.69
XPAP23025 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.49□□□□□ -1.69
XPAP23025 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
XPAP23025 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.49□□□□□ -1.69
XPAP23025 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
XPAP23025 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 RNU6-511P-201ENST00000363496 107 ntBASIC4.48□□□□□ -1.69
XPAP23025 SNORA62-201ENST00000365493 153 ntBASIC4.48□□□□□ -1.69
XPAP23025 RNU6-821P-201ENST00000390995 107 ntBASIC4.48□□□□□ -1.69
XPAP23025 RNU2-62P-201ENST00000410868 191 ntBASIC4.48□□□□□ -1.69
XPAP23025 RPS20P14-201ENST00000412545 360 ntBASIC4.48□□□□□ -1.69
XPAP23025 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 EIF1P3-201ENST00000423841 334 ntBASIC4.48□□□□□ -1.69
XPAP23025 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.48□□□□□ -1.69
XPAP23025 RPS20P5-201ENST00000434808 360 ntBASIC4.48□□□□□ -1.69
XPAP23025 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.48□□□□□ -1.69
XPAP23025 AC007967.1-201ENST00000455422 1159 ntBASIC4.48□□□□□ -1.69
XPAP23025 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.48□□□□□ -1.69
XPAP23025 AC108059.3-201ENST00000456388 214 ntBASIC4.48□□□□□ -1.69
XPAP23025 RNU7-59P-201ENST00000459101 61 ntBASIC4.48□□□□□ -1.69
XPAP23025 AC011276.1-201ENST00000469688 323 ntBASIC4.48□□□□□ -1.69
XPAP23025 AC108751.2-201ENST00000469993 231 ntBASIC4.48□□□□□ -1.69
XPAP23025 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.48□□□□□ -1.69
XPAP23025 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.48□□□□□ -1.69
XPAP23025 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.48□□□□□ -1.69
XPAP23025 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.48□□□□□ -1.69
XPAP23025 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.48□□□□□ -1.69
XPAP23025 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.48□□□□□ -1.69
XPAP23025 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.48□□□□□ -1.69
XPAP23025 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.48□□□□□ -1.69
XPAP23025 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.48□□□□□ -1.69
XPAP23025 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 AP001029.3-201ENST00000588063 596 ntBASIC4.48□□□□□ -1.69
XPAP23025 AP001429.1-201ENST00000602568 530 ntBASIC4.48□□□□□ -1.69
XPAP23025 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.48□□□□□ -1.69
XPAP23025 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.48□□□□□ -1.69
XPAP23025 AC004908.2-201ENST00000609090 574 ntBASIC4.48□□□□□ -1.69
XPAP23025 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.48□□□□□ -1.69
XPAP23025 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.48□□□□□ -1.69
XPAP23025 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 AC018529.3-201ENST00000624212 2254 ntBASIC4.48□□□□□ -1.69
XPAP23025 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.48□□□□□ -1.69
XPAP23025 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.48□□□□□ -1.69
XPAP23025 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XPAP23025 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.47□□□□□ -1.69
XPAP23025 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.47□□□□□ -1.69
XPAP23025 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
XPAP23025 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
XPAP23025 RPL32P3-201ENST00000359025 275 ntBASIC4.47□□□□□ -1.69
XPAP23025 U3.11-201ENST00000364476 212 ntBASIC4.47□□□□□ -1.69
XPAP23025 RNA5SP509-201ENST00000364577 119 ntBASIC4.47□□□□□ -1.69
XPAP23025 RNU1-63P-201ENST00000383902 164 ntBASIC4.47□□□□□ -1.69
XPAP23025 MIR921-201ENST00000401133 56 ntBASIC4.47□□□□□ -1.69
XPAP23025 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.47□□□□□ -1.69
XPAP23025 AC018630.2-202ENST00000422992 927 ntBASIC4.47□□□□□ -1.69
XPAP23025 RPL21P91-201ENST00000429231 479 ntBASIC4.47□□□□□ -1.69
XPAP23025 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.47□□□□□ -1.69
XPAP23025 AL132765.1-201ENST00000434165 553 ntBASIC4.47□□□□□ -1.69
XPAP23025 MTATP6P16-201ENST00000434543 526 ntBASIC4.47□□□□□ -1.69
XPAP23025 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.47□□□□□ -1.69
XPAP23025 snoU109.4-201ENST00000458953 143 ntBASIC4.47□□□□□ -1.69
XPAP23025 AP000873.1-201ENST00000463987 400 ntBASIC4.47□□□□□ -1.69
XPAP23025 ST13P14-201ENST00000474095 734 ntBASIC4.47□□□□□ -1.69
XPAP23025 AC078785.3-201ENST00000476607 425 ntBASIC4.47□□□□□ -1.69
XPAP23025 AC108022.1-201ENST00000493466 478 ntBASIC4.47□□□□□ -1.69
XPAP23025 RN7SL812P-201ENST00000493791 279 ntBASIC4.47□□□□□ -1.69
XPAP23025 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.47□□□□□ -1.69
XPAP23025 SNORD27.1-201ENST00000516319 72 ntBASIC4.47□□□□□ -1.69
XPAP23025 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.47□□□□□ -1.69
XPAP23025 SUB1P1-201ENST00000524415 382 ntBASIC4.47□□□□□ -1.69
XPAP23025 CR383656.7-201ENST00000548164 174 ntBASIC4.47□□□□□ -1.69
XPAP23025 AC128657.1-201ENST00000549459 145 ntBASIC4.47□□□□□ -1.69
XPAP23025 ARL2BPP2-201ENST00000550907 489 ntBASIC4.47□□□□□ -1.69
XPAP23025 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.47□□□□□ -1.69
XPAP23025 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.47□□□□□ -1.69
XPAP23025 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms