Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FO393413.1-201ENST00000402892 195 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGA1P17096 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 RPS6P14-201ENST00000425165 719 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGA1P17096 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.75□□□□□ -2.13
HMGA1P17096 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGA1P17096 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.75□□□□□ -2.13
HMGA1P17096 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMGA1P17096 ACTR3BP3-201ENST00000565577 979 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 MIR3690-201ENST00000580266 75 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGA1P17096 AP003117.2-201ENST00000606010 545 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 AC024560.3-201ENST00000608482 349 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HMGA1P17096 AC006249.1-201ENST00000621223 471 ntBASIC1.75□□□□□ -2.13
HMGA1P17096 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMGA1P17096 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
HMGA1P17096 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGA1P17096 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMGA1P17096 CD24P4-201ENST00000382840 243 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 RNU4-62P-201ENST00000410125 130 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AL592045.1-201ENST00000429867 352 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.74□□□□□ -2.13
HMGA1P17096 AC234775.1-201ENST00000454247 670 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGA1P17096 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGA1P17096 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGA1P17096 HMGB1P47-201ENST00000511281 589 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGA1P17096 AP000790.1-201ENST00000528891 737 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGA1P17096 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGA1P17096 AC019159.1-201ENST00000605094 187 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AC105429.2-201ENST00000610567 517 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AL390240.1-201ENST00000612950 384 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 AC140725.3-201ENST00000616193 880 ntBASIC1.74□□□□□ -2.13
HMGA1P17096 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGA1P17096 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGA1P17096 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMGA1P17096 RNA5SP27-201ENST00000363839 119 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 MCTS2P-201ENST00000394552 546 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 ANAPC10P1-201ENST00000395991 556 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 NPM1P10-201ENST00000398310 865 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 Y_RNA.595-201ENST00000410403 105 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGA1P17096 BTF3P4-201ENST00000418852 495 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 AC093084.1-201ENST00000424233 687 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGA1P17096 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGA1P17096 RPL23AP76-201ENST00000441860 458 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 RPL17P49-201ENST00000443728 411 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGA1P17096 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGA1P17096 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGA1P17096 MLLT10P2-201ENST00000506434 249 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGA1P17096 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGA1P17096 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGA1P17096 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGA1P17096 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 AP001004.1-201ENST00000582468 324 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGA1P17096 AC104307.1-201ENST00000616142 196 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGA1P17096 Z82209.1-201ENST00000422141 2135 ntBASIC1.73□□□□□ -2.13
HMGA1P17096 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGA1P17096 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGA1P17096 AL121972.1-201ENST00000402023 252 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 RNA5SP270-201ENST00000411361 118 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGA1P17096 TOMM22P1-201ENST00000418578 312 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGA1P17096 HMGB1P45-201ENST00000435986 653 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 TPT1P14-201ENST00000448018 505 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGA1P17096 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGA1P17096 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGA1P17096 AC104472.2-201ENST00000469035 601 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 AC069528.1-202ENST00000482888 637 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 AC005912.1-201ENST00000495392 255 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 MTCYBP17-201ENST00000503579 789 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGA1P17096 AC117532.1-201ENST00000514638 323 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGA1P17096 VN1R80P-201ENST00000597126 338 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 AC012150.2-201ENST00000621300 544 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMGA1P17096 AL359715.4-201ENST00000606629 1436 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGA1P17096 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
HMGA1P17096 RNU2-40P-201ENST00000410833 196 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 AC109780.2-201ENST00000413467 845 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGA1P17096 HMGB1P27-201ENST00000431429 603 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 HMGB1P18-201ENST00000438801 619 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGA1P17096 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGA1P17096 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms