Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RNA5SP107-201ENST00000411358 122 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 RNU6-516P-201ENST00000411381 104 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 OR6C66P-201ENST00000414917 930 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.98□□□□□ -1.61
ITGA4P13612 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.98□□□□□ -1.61
ITGA4P13612 AC092017.2-201ENST00000427600 362 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 AC008065.1-201ENST00000428525 348 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.98□□□□□ -1.61
ITGA4P13612 AC236972.2-201ENST00000434979 310 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 RPL12P46-201ENST00000436610 195 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.98□□□□□ -1.61
ITGA4P13612 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.98□□□□□ -1.61
ITGA4P13612 RPL23AP93-201ENST00000440847 484 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 ST13P14-201ENST00000474095 734 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ITGA4P13612 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.98□□□□□ -1.61
ITGA4P13612 AC091885.1-201ENST00000506658 268 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 FAM206BP-201ENST00000510179 541 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 AC015795.1-201ENST00000513669 327 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 HIGD1AP3-201ENST00000515857 278 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 RN7SKP13-201ENST00000515933 244 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 MYL12AP1-201ENST00000518490 515 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.98□□□□□ -1.61
ITGA4P13612 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.98□□□□□ -1.61
ITGA4P13612 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ITGA4P13612 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ITGA4P13612 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.98□□□□□ -1.61
ITGA4P13612 AC015912.2-201ENST00000571053 181 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
ITGA4P13612 MIR4424-201ENST00000585257 86 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 AC103710.3-201ENST00000608157 948 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.98□□□□□ -1.61
ITGA4P13612 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.98□□□□□ -1.61
ITGA4P13612 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.98□□□□□ -1.61
ITGA4P13612 AL596275.2-204ENST00000641628 552 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 AL596275.2-206ENST00000641957 626 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.98□□□□□ -1.61
ITGA4P13612 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ITGA4P13612 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
ITGA4P13612 AC025031.4-201ENST00000621248 3271 ntBASIC4.98□□□□□ -1.61
ITGA4P13612 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
ITGA4P13612 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.97□□□□□ -1.61
ITGA4P13612 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
ITGA4P13612 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
ITGA4P13612 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
ITGA4P13612 RNU6-989P-201ENST00000362756 107 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RNU6-179P-201ENST00000363350 107 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 Y_RNA.132-201ENST00000363421 102 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RNU6-188P-201ENST00000364207 107 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.97□□□□□ -1.61
ITGA4P13612 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 AC068538.1-201ENST00000376856 336 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 Y_RNA.387-201ENST00000383918 102 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RNU6-432P-201ENST00000384196 109 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RNU6-178P-201ENST00000384631 104 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 MIR659-201ENST00000384963 97 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 MT-TC-201ENST00000387405 66 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RNU11-4P-201ENST00000391149 133 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RNU4-25P-201ENST00000410569 230 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 BX323014.1-201ENST00000412876 237 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 AL356387.2-201ENST00000422272 243 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RPL23AP38-201ENST00000423801 469 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RPS12P10-201ENST00000427031 377 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.97□□□□□ -1.61
ITGA4P13612 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.97□□□□□ -1.61
ITGA4P13612 AC005094.1-201ENST00000440420 368 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.97□□□□□ -1.61
ITGA4P13612 RPL36AP13-201ENST00000457490 317 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RNU7-180P-201ENST00000459240 63 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 AC011276.1-201ENST00000469688 323 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 RPL23AP11-201ENST00000475260 469 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 AC135721.1-201ENST00000497954 479 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 IGLVIV-65-201ENST00000517313 360 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.97□□□□□ -1.61
ITGA4P13612 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.97□□□□□ -1.61
ITGA4P13612 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.97□□□□□ -1.61
ITGA4P13612 PARP1P2-201ENST00000556806 195 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 AC233702.9-201ENST00000581528 203 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 MIR4293-201ENST00000584305 78 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.97□□□□□ -1.61
ITGA4P13612 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.97□□□□□ -1.61
ITGA4P13612 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.97□□□□□ -1.61
ITGA4P13612 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.97□□□□□ -1.61
ITGA4P13612 U6.114-201ENST00000636407 96 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ITGA4P13612 AC009951.1-201ENST00000623674 2614 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.97□□□□□ -1.61
ITGA4P13612 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.97□□□□□ -1.61
ITGA4P13612 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.97□□□□□ -1.61
ITGA4P13612 AL391684.1-202ENST00000641293 1636 ntBASIC4.97□□□□□ -1.61
ITGA4P13612 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms