Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL590365.1-201ENST00000450788 243 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.91□□□□□ -1.78
MMP3P08254 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.91□□□□□ -1.78
MMP3P08254 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.91□□□□□ -1.78
MMP3P08254 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.91□□□□□ -1.78
MMP3P08254 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.91□□□□□ -1.78
MMP3P08254 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MMP3P08254 RN7SKP234-201ENST00000517173 224 ntBASIC3.91□□□□□ -1.78
MMP3P08254 IGKV2-26-201ENST00000518305 343 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.91□□□□□ -1.78
MMP3P08254 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.91□□□□□ -1.78
MMP3P08254 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.91□□□□□ -1.78
MMP3P08254 MIR4458-201ENST00000578872 75 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.91□□□□□ -1.78
MMP3P08254 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.91□□□□□ -1.78
MMP3P08254 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.91□□□□□ -1.78
MMP3P08254 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MMP3P08254 AC091965.4-201ENST00000607691 587 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AC015813.4-201ENST00000610469 179 ntBASIC3.91□□□□□ -1.78
MMP3P08254 Z99129.1-201ENST00000612510 255 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AC138932.5-201ENST00000617759 563 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.91□□□□□ -1.78
MMP3P08254 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MMP3P08254 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MMP3P08254 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MMP3P08254 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.9□□□□□ -1.78
MMP3P08254 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
MMP3P08254 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
MMP3P08254 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
MMP3P08254 AL359893.1-201ENST00000447628 1580 ntBASIC3.9□□□□□ -1.78
MMP3P08254 MAPK10-253ENST00000641010 4072 ntBASIC3.9□□□□□ -1.78
MMP3P08254 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
MMP3P08254 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.9□□□□□ -1.78
MMP3P08254 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MMP3P08254 Y_RNA.3-201ENST00000362331 103 ntBASIC3.9□□□□□ -1.79
MMP3P08254 RNU6-28P-201ENST00000362378 107 ntBASIC3.9□□□□□ -1.79
MMP3P08254 RNU6-853P-201ENST00000364306 107 ntBASIC3.9□□□□□ -1.79
MMP3P08254 RNU4-91P-201ENST00000364778 135 ntBASIC3.9□□□□□ -1.79
MMP3P08254 RNU6-730P-201ENST00000383954 104 ntBASIC3.9□□□□□ -1.79
MMP3P08254 SNORA48.2-201ENST00000390926 124 ntBASIC3.9□□□□□ -1.79
MMP3P08254 SNORA40.3-201ENST00000390964 122 ntBASIC3.9□□□□□ -1.79
MMP3P08254 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 U3.39-201ENST00000408569 239 ntBASIC3.9□□□□□ -1.79
MMP3P08254 MTCO1P17-201ENST00000411522 491 ntBASIC3.9□□□□□ -1.79
MMP3P08254 MTATP6P27-201ENST00000416987 621 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC007742.1-201ENST00000425789 329 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.9□□□□□ -1.79
MMP3P08254 ELOCP26-201ENST00000436067 329 ntBASIC3.9□□□□□ -1.79
MMP3P08254 Z82190.1-201ENST00000454534 490 ntBASIC3.9□□□□□ -1.79
MMP3P08254 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC025445.1-201ENST00000502728 300 ntBASIC3.9□□□□□ -1.79
MMP3P08254 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 AC022447.3-201ENST00000506865 495 ntBASIC3.9□□□□□ -1.79
MMP3P08254 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.9□□□□□ -1.79
MMP3P08254 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.9□□□□□ -1.79
MMP3P08254 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.9□□□□□ -1.79
MMP3P08254 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.9□□□□□ -1.79
MMP3P08254 RNU6-405P-201ENST00000516637 110 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 MTCYBP20-201ENST00000524239 1129 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 AP003392.2-201ENST00000527269 208 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.9□□□□□ -1.79
MMP3P08254 AC112187.2-201ENST00000604345 283 ntBASIC3.9□□□□□ -1.79
MMP3P08254 YPEL5P2-201ENST00000605553 359 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AL021997.1-201ENST00000605757 193 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC080013.4-201ENST00000607624 649 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.9□□□□□ -1.79
MMP3P08254 uc_338.32-201ENST00000615087 172 ntBASIC3.9□□□□□ -1.79
MMP3P08254 AC015540.1-201ENST00000615828 501 ntBASIC3.9□□□□□ -1.79
MMP3P08254 MIR7112-201ENST00000616126 65 ntBASIC3.9□□□□□ -1.79
MMP3P08254 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.9□□□□□ -1.79
MMP3P08254 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.9□□□□□ -1.79
MMP3P08254 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.79
MMP3P08254 AL603839.4-201ENST00000624658 1005 ntBASIC3.9□□□□□ -1.79
MMP3P08254 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.9□□□□□ -1.79
MMP3P08254 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.9□□□□□ -1.79
MMP3P08254 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 AL645937.1-201ENST00000641739 1652 ntBASIC3.9□□□□□ -1.79
MMP3P08254 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
MMP3P08254 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MMP3P08254 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MMP3P08254 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 AC090229.1-201ENST00000590983 1609 ntBASIC3.89□□□□□ -1.79
MMP3P08254 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.89□□□□□ -1.79
MMP3P08254 MTND5P29-201ENST00000458676 1807 ntBASIC3.89□□□□□ -1.79
MMP3P08254 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MMP3P08254 RNU6-263P-201ENST00000363811 107 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms