Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPBP07988 RSU1P2-202ENST00000437884 485 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPBP07988 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPBP07988 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.04□□□□□ -1.92
SFTPBP07988 HSPE1P6-201ENST00000479457 291 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 RPL30P14-201ENST00000482744 348 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.04□□□□□ -1.92
SFTPBP07988 AC110768.1-201ENST00000509222 400 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.04□□□□□ -1.92
SFTPBP07988 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.04□□□□□ -1.92
SFTPBP07988 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPBP07988 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.04□□□□□ -1.92
SFTPBP07988 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPBP07988 AC009097.3-201ENST00000563557 1018 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 MIR3921-201ENST00000577308 85 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPBP07988 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.04□□□□□ -1.92
SFTPBP07988 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPBP07988 AC013244.3-201ENST00000605614 388 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 AC024560.3-201ENST00000608482 349 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 AL603758.1-201ENST00000618654 241 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 AC009093.8-201ENST00000641769 292 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SFTPBP07988 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SFTPBP07988 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SFTPBP07988 AC090740.1-201ENST00000623193 2262 ntBASIC3.04□□□□□ -1.92
SFTPBP07988 SRP72P2-201ENST00000344851 1979 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.03□□□□□ -1.92
SFTPBP07988 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SFTPBP07988 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SFTPBP07988 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SFTPBP07988 AL672167.1-206ENST00000356293 943 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 MIR30E-201ENST00000362104 92 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 RNU6-433P-201ENST00000363216 104 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 SNORD113-6-201ENST00000363345 75 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 RNU4-28P-201ENST00000364739 141 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 RNU6-637P-201ENST00000384050 107 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 MIR34B-201ENST00000385076 84 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 MTCO1P17-201ENST00000411522 491 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 RPS29P4-201ENST00000414733 161 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.03□□□□□ -1.92
SFTPBP07988 AC017079.2-201ENST00000416102 485 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.03□□□□□ -1.92
SFTPBP07988 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.03□□□□□ -1.92
SFTPBP07988 TMEM167AP1-201ENST00000423409 219 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 MTCO2P17-201ENST00000424336 677 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.03□□□□□ -1.92
SFTPBP07988 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.03□□□□□ -1.92
SFTPBP07988 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.03□□□□□ -1.92
SFTPBP07988 RPS3AP46-201ENST00000448352 682 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.03□□□□□ -1.92
SFTPBP07988 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.03□□□□□ -1.92
SFTPBP07988 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.03□□□□□ -1.92
SFTPBP07988 AC093809.1-201ENST00000509155 340 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 RNU2-27P-201ENST00000516185 142 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.03□□□□□ -1.92
SFTPBP07988 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.03□□□□□ -1.92
SFTPBP07988 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.03□□□□□ -1.92
SFTPBP07988 AC011260.1-201ENST00000578420 472 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.03□□□□□ -1.92
SFTPBP07988 BNIP3P38-201ENST00000601117 544 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 AL160281.1-201ENST00000605307 311 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 U3.45-201ENST00000607547 219 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 MIR6076-201ENST00000617521 113 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 AC023510.2-201ENST00000622162 746 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 AC099063.3-201ENST00000642066 185 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SFTPBP07988 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SFTPBP07988 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.03□□□□□ -1.92
SFTPBP07988 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.03□□□□□ -1.92
SFTPBP07988 AC008568.2-201ENST00000623862 2313 ntBASIC3.03□□□□□ -1.92
SFTPBP07988 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
SFTPBP07988 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.03□□□□□ -1.93
SFTPBP07988 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
SFTPBP07988 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPBP07988 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.02□□□□□ -1.93
SFTPBP07988 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.02□□□□□ -1.93
SFTPBP07988 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPBP07988 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPBP07988 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPBP07988 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPBP07988 AP002088.1-201ENST00000382740 395 ntBASIC3.02□□□□□ -1.93
SFTPBP07988 SNORA36C-201ENST00000384289 132 ntBASIC3.02□□□□□ -1.93
SFTPBP07988 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.02□□□□□ -1.93
SFTPBP07988 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPBP07988 AL022400.1-201ENST00000423946 935 ntBASIC3.02□□□□□ -1.93
SFTPBP07988 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPBP07988 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.02□□□□□ -1.93
SFTPBP07988 HMGN2P31-201ENST00000432430 273 ntBASIC3.02□□□□□ -1.93
SFTPBP07988 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.02□□□□□ -1.93
SFTPBP07988 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.02□□□□□ -1.93
SFTPBP07988 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.02□□□□□ -1.93
SFTPBP07988 AL590664.1-201ENST00000448065 339 ntBASIC3.02□□□□□ -1.93
SFTPBP07988 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.02□□□□□ -1.93
SFTPBP07988 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.02□□□□□ -1.93
SFTPBP07988 AC010401.1-201ENST00000463867 348 ntBASIC3.02□□□□□ -1.93
SFTPBP07988 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.02□□□□□ -1.93
SFTPBP07988 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms