Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AC090666.1-201ENST00000578241 445 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.91□□□□□ -2.1
CTSDP07339 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.91□□□□□ -2.1
CTSDP07339 AF131215.7-201ENST00000602443 707 ntBASIC1.91□□□□□ -2.1
CTSDP07339 U73023.1-201ENST00000603134 700 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AP001330.4-201ENST00000604350 154 ntBASIC1.91□□□□□ -2.1
CTSDP07339 BNIP3P19-201ENST00000605397 577 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AC013562.2-201ENST00000611632 603 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AL138880.2-201ENST00000616214 239 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.91□□□□□ -2.1
CTSDP07339 MIR6766-201ENST00000622641 72 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.91□□□□□ -2.1
CTSDP07339 SCARNA15.3-201ENST00000626315 122 ntBASIC1.91□□□□□ -2.1
CTSDP07339 SCARNA4.1-201ENST00000628597 123 ntBASIC1.91□□□□□ -2.1
CTSDP07339 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CTSDP07339 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CTSDP07339 AC011460.1-201ENST00000636268 1834 ntBASIC1.91□□□□□ -2.1
CTSDP07339 AL049780.3-201ENST00000624612 1583 ntBASIC1.9□□□□□ -2.1
CTSDP07339 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.9□□□□□ -2.11
CTSDP07339 SNORA1.3-201ENST00000384676 136 ntBASIC1.9□□□□□ -2.11
CTSDP07339 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CTSDP07339 RPS4XP3-201ENST00000398541 413 ntBASIC1.9□□□□□ -2.11
CTSDP07339 ATP5F1P6-201ENST00000402768 767 ntBASIC1.9□□□□□ -2.11
CTSDP07339 HMGB3P31-201ENST00000413333 595 ntBASIC1.9□□□□□ -2.11
CTSDP07339 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CTSDP07339 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 RPS15AP28-201ENST00000435088 386 ntBASIC1.9□□□□□ -2.11
CTSDP07339 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 IPO7P1-201ENST00000442031 636 ntBASIC1.9□□□□□ -2.11
CTSDP07339 XKRY2-201ENST00000442362 1093 ntBASIC1.9□□□□□ -2.11
CTSDP07339 DPPA3P1-201ENST00000448050 469 ntBASIC1.9□□□□□ -2.11
CTSDP07339 RPS27P23-201ENST00000487608 251 ntBASIC1.9□□□□□ -2.11
CTSDP07339 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.9□□□□□ -2.11
CTSDP07339 AC090255.1-201ENST00000495779 349 ntBASIC1.9□□□□□ -2.11
CTSDP07339 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.9□□□□□ -2.11
CTSDP07339 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CTSDP07339 AC025768.1-201ENST00000510057 267 ntBASIC1.9□□□□□ -2.11
CTSDP07339 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CTSDP07339 AP001804.3-201ENST00000525146 880 ntBASIC1.9□□□□□ -2.11
CTSDP07339 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CTSDP07339 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CTSDP07339 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.9□□□□□ -2.11
CTSDP07339 AC012414.2-201ENST00000559474 187 ntBASIC1.9□□□□□ -2.11
CTSDP07339 AC022069.1-201ENST00000582910 658 ntBASIC1.9□□□□□ -2.11
CTSDP07339 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.9□□□□□ -2.11
CTSDP07339 AC103810.6-201ENST00000606708 136 ntBASIC1.9□□□□□ -2.11
CTSDP07339 AC106028.5-201ENST00000610332 395 ntBASIC1.9□□□□□ -2.11
CTSDP07339 AC073968.1-201ENST00000618594 637 ntBASIC1.9□□□□□ -2.11
CTSDP07339 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.9□□□□□ -2.11
CTSDP07339 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CTSDP07339 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CTSDP07339 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CTSDP07339 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CTSDP07339 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CTSDP07339 MTCO1P6-201ENST00000481192 1384 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC007342.9-201ENST00000623877 1385 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC004944.1-201ENST00000517807 3059 ntBASIC1.89□□□□□ -2.11
CTSDP07339 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.89□□□□□ -2.11
CTSDP07339 RNA5SP68-201ENST00000363885 119 ntBASIC1.89□□□□□ -2.11
CTSDP07339 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CTSDP07339 MIR634-201ENST00000385208 97 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AL031679.1-201ENST00000400616 525 ntBASIC1.89□□□□□ -2.11
CTSDP07339 MTND4LP20-201ENST00000402379 270 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AL589655.1-201ENST00000405398 482 ntBASIC1.89□□□□□ -2.11
CTSDP07339 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.89□□□□□ -2.11
CTSDP07339 RNU6-712P-201ENST00000410558 100 ntBASIC1.89□□□□□ -2.11
CTSDP07339 RN7SKP140-201ENST00000411196 284 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC099677.1-201ENST00000420575 175 ntBASIC1.89□□□□□ -2.11
CTSDP07339 RPL7P37-201ENST00000425095 738 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.89□□□□□ -2.11
CTSDP07339 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.89□□□□□ -2.11
CTSDP07339 DNAJC19P8-201ENST00000452887 259 ntBASIC1.89□□□□□ -2.11
CTSDP07339 HMGN3P1-201ENST00000453847 193 ntBASIC1.89□□□□□ -2.11
CTSDP07339 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.89□□□□□ -2.11
CTSDP07339 GTF2IP9-201ENST00000502460 301 ntBASIC1.89□□□□□ -2.11
CTSDP07339 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.89□□□□□ -2.11
CTSDP07339 MLLT10P2-201ENST00000506434 249 ntBASIC1.89□□□□□ -2.11
CTSDP07339 RNA5SP148-201ENST00000516527 94 ntBASIC1.89□□□□□ -2.11
CTSDP07339 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.89□□□□□ -2.11
CTSDP07339 HIGD1AP6-201ENST00000521833 279 ntBASIC1.89□□□□□ -2.11
CTSDP07339 OR10V3P-201ENST00000525712 725 ntBASIC1.89□□□□□ -2.11
CTSDP07339 OR8K4P-201ENST00000534608 872 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC018630.1-201ENST00000541376 925 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC126177.3-201ENST00000551839 688 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AP005205.1-201ENST00000563503 508 ntBASIC1.89□□□□□ -2.11
CTSDP07339 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.89□□□□□ -2.11
CTSDP07339 MIR5007-201ENST00000583098 95 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.89□□□□□ -2.11
CTSDP07339 AC008739.2-201ENST00000597006 317 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.89□□□□□ -2.11
CTSDP07339 AC112503.2-201ENST00000609005 552 ntBASIC1.89□□□□□ -2.11
CTSDP07339 MIR6817-201ENST00000615588 66 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC068722.2-201ENST00000618734 544 ntBASIC1.89□□□□□ -2.11
CTSDP07339 AC090617.9-201ENST00000623751 147 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms