Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC002487.1-201ENST00000604565 994 ntBASIC1.05□□□□□ -2.24
APOBP04114 NR1H5P-201ENST00000452683 1377 ntBASIC1.04□□□□□ -2.24
APOBP04114 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
APOBP04114 PAICSP7-201ENST00000419829 962 ntBASIC1.04□□□□□ -2.24
APOBP04114 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.04□□□□□ -2.24
APOBP04114 HMGB1P12-201ENST00000438594 598 ntBASIC1.04□□□□□ -2.24
APOBP04114 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.04□□□□□ -2.24
APOBP04114 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
APOBP04114 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
APOBP04114 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.04□□□□□ -2.24
APOBP04114 AC012150.2-201ENST00000621300 544 ntBASIC1.04□□□□□ -2.24
APOBP04114 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.04□□□□□ -2.24
APOBP04114 AC245100.2-201ENST00000454544 1679 ntBASIC1.04□□□□□ -2.24
APOBP04114 PIGFP3-201ENST00000441918 722 ntBASIC1.04□□□□□ -2.24
APOBP04114 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.04□□□□□ -2.24
APOBP04114 AC104986.1-201ENST00000517978 436 ntBASIC1.04□□□□□ -2.24
APOBP04114 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.04□□□□□ -2.24
APOBP04114 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.04□□□□□ -2.24
APOBP04114 AC024614.2-201ENST00000577584 372 ntBASIC1.04□□□□□ -2.24
APOBP04114 AC245036.5-201ENST00000596330 847 ntBASIC1.04□□□□□ -2.24
APOBP04114 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.04□□□□□ -2.24
APOBP04114 AC010678.1-201ENST00000614118 713 ntBASIC1.04□□□□□ -2.24
APOBP04114 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
APOBP04114 SEPT7P7-201ENST00000420492 1301 ntBASIC1.04□□□□□ -2.24
APOBP04114 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
APOBP04114 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.04□□□□□ -2.24
APOBP04114 SNORA7.1-201ENST00000363750 139 ntBASIC1.04□□□□□ -2.24
APOBP04114 MIR520E-201ENST00000384867 87 ntBASIC1.04□□□□□ -2.24
APOBP04114 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.04□□□□□ -2.24
APOBP04114 AC092473.1-201ENST00000441098 221 ntBASIC1.04□□□□□ -2.24
APOBP04114 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.04□□□□□ -2.24
APOBP04114 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.04□□□□□ -2.24
APOBP04114 AC091895.1-201ENST00000624494 256 ntBASIC1.04□□□□□ -2.24
APOBP04114 MTCO1P6-201ENST00000481192 1384 ntBASIC1.04□□□□□ -2.24
APOBP04114 AC012321.1-201ENST00000561622 1588 ntBASIC1.04□□□□□ -2.24
APOBP04114 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
APOBP04114 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
APOBP04114 AL354695.1-201ENST00000427935 228 ntBASIC1.03□□□□□ -2.24
APOBP04114 AC090774.1-201ENST00000435925 246 ntBASIC1.03□□□□□ -2.24
APOBP04114 AL513321.1-201ENST00000441175 761 ntBASIC1.03□□□□□ -2.24
APOBP04114 AL021397.1-201ENST00000451806 248 ntBASIC1.03□□□□□ -2.24
APOBP04114 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
APOBP04114 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.03□□□□□ -2.24
APOBP04114 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
APOBP04114 AC090751.1-201ENST00000566966 267 ntBASIC1.03□□□□□ -2.24
APOBP04114 OR4G1P-201ENST00000588632 938 ntBASIC1.03□□□□□ -2.24
APOBP04114 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
APOBP04114 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
APOBP04114 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
APOBP04114 AL136133.1-201ENST00000413694 376 ntBASIC1.03□□□□□ -2.24
APOBP04114 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.03□□□□□ -2.24
APOBP04114 MTCYBP7-201ENST00000419540 1134 ntBASIC1.03□□□□□ -2.24
APOBP04114 RPL21P2-201ENST00000440049 481 ntBASIC1.03□□□□□ -2.24
APOBP04114 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.03□□□□□ -2.24
APOBP04114 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
APOBP04114 RNU1-42P-201ENST00000364033 160 ntBASIC1.03□□□□□ -2.24
APOBP04114 RNA5SP37-201ENST00000365420 130 ntBASIC1.03□□□□□ -2.24
APOBP04114 MIR1323-201ENST00000408090 73 ntBASIC1.03□□□□□ -2.24
APOBP04114 RNA5SP239-201ENST00000410218 129 ntBASIC1.03□□□□□ -2.24
APOBP04114 CALM1P2-201ENST00000452941 448 ntBASIC1.03□□□□□ -2.24
APOBP04114 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.03□□□□□ -2.24
APOBP04114 AC109486.1-201ENST00000486833 374 ntBASIC1.03□□□□□ -2.24
APOBP04114 AC006499.2-201ENST00000513470 337 ntBASIC1.03□□□□□ -2.24
APOBP04114 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.03□□□□□ -2.24
APOBP04114 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.03□□□□□ -2.24
APOBP04114 FO624990.1-201ENST00000636373 85 ntBASIC1.03□□□□□ -2.24
APOBP04114 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
APOBP04114 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
APOBP04114 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
APOBP04114 AP001148.1-201ENST00000624124 2359 ntBASIC1.03□□□□□ -2.25
APOBP04114 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
APOBP04114 RNA5SP138-201ENST00000365098 114 ntBASIC1.03□□□□□ -2.25
APOBP04114 AC092638.1-201ENST00000411966 1275 ntBASIC1.03□□□□□ -2.25
APOBP04114 HMGN2P35-201ENST00000412164 270 ntBASIC1.03□□□□□ -2.25
APOBP04114 AL445213.1-201ENST00000412589 747 ntBASIC1.03□□□□□ -2.25
APOBP04114 AC013470.3-201ENST00000420252 1194 ntBASIC1.03□□□□□ -2.25
APOBP04114 BNIP3P2-201ENST00000441221 577 ntBASIC1.03□□□□□ -2.25
APOBP04114 AIG1P1-201ENST00000503376 148 ntBASIC1.03□□□□□ -2.25
APOBP04114 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.03□□□□□ -2.25
APOBP04114 AC090819.1-201ENST00000523800 1111 ntBASIC1.03□□□□□ -2.25
APOBP04114 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.03□□□□□ -2.25
APOBP04114 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.03□□□□□ -2.25
APOBP04114 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.03□□□□□ -2.25
APOBP04114 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
APOBP04114 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
APOBP04114 AL138799.3-201ENST00000438968 350 ntBASIC1.02□□□□□ -2.25
APOBP04114 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.02□□□□□ -2.25
APOBP04114 RPL21P134-201ENST00000453468 483 ntBASIC1.02□□□□□ -2.25
APOBP04114 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.02□□□□□ -2.25
APOBP04114 HMGN1P28-201ENST00000521340 364 ntBASIC1.02□□□□□ -2.25
APOBP04114 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.02□□□□□ -2.25
APOBP04114 AC017076.1-201ENST00000607613 578 ntBASIC1.02□□□□□ -2.25
APOBP04114 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.02□□□□□ -2.25
APOBP04114 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
APOBP04114 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
APOBP04114 BTBD10P2-201ENST00000404779 676 ntBASIC1.02□□□□□ -2.25
APOBP04114 AF274854.1-201ENST00000413236 615 ntBASIC1.02□□□□□ -2.25
APOBP04114 AL365400.1-201ENST00000431854 640 ntBASIC1.02□□□□□ -2.25
APOBP04114 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
APOBP04114 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms