Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC140059.1-201ENST00000489238 361 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC067904.2-201ENST00000517322 1283 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A1P02462 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.12□□□□□ -2.07
COL4A1P02462 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A1P02462 AL049838.1-201ENST00000563647 981 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A1P02462 AC084373.1-201ENST00000603311 235 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AL110115.1-201ENST00000614396 364 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AL590099.1-201ENST00000615276 138 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 RMST_5.1-201ENST00000618704 126 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC145207.9-201ENST00000623802 325 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A1P02462 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
COL4A1P02462 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A1P02462 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A1P02462 Y_RNA.116-201ENST00000363292 103 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 MIR518E-201ENST00000385252 88 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COL4A1P02462 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A1P02462 MTND2P2-201ENST00000434633 945 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A1P02462 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A1P02462 AL138799.3-201ENST00000438968 350 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 MTCYBP12-201ENST00000440559 1134 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A1P02462 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.12□□□□□ -2.07
COL4A1P02462 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.12□□□□□ -2.07
COL4A1P02462 ATG10-AS1-201ENST00000504846 648 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC107393.1-201ENST00000512403 346 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC108120.2-201ENST00000512973 294 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 SNORA48.9-201ENST00000516419 162 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 RPS3AP4-201ENST00000555161 764 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AL161713.1-201ENST00000555538 145 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A1P02462 AC090751.1-201ENST00000566966 267 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC110792.3-201ENST00000595906 1614 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A1P02462 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A1P02462 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.11□□□□□ -2.07
COL4A1P02462 AC004520.1-201ENST00000608362 1413 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 DCAF13P1-201ENST00000495256 1330 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A1P02462 RNY1P10-201ENST00000363268 113 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 MIR499A-201ENST00000384903 122 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A1P02462 HSPE1P28-201ENST00000443139 211 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A1P02462 MTND3P6-201ENST00000485242 339 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 MTCYBP17-201ENST00000503579 789 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 RNU6-751P-201ENST00000516382 101 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 PTP4A1P6-201ENST00000531034 478 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A1P02462 OR4T1P-201ENST00000554933 911 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 MIR4419B-201ENST00000577260 68 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.11□□□□□ -2.07
COL4A1P02462 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A1P02462 AC013444.2-201ENST00000603317 787 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 AC022387.2-201ENST00000604050 448 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.11□□□□□ -2.07
COL4A1P02462 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL4A1P02462 AL355578.1-201ENST00000607405 1328 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 SNORD48-201ENST00000364953 64 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 AL034374.1-201ENST00000406329 351 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 TRIM60P18-201ENST00000441518 828 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 TAF9P1-201ENST00000445421 515 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 CASP3P1-201ENST00000446037 609 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 Z73417.1-201ENST00000447373 778 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 AL627224.1-201ENST00000448334 444 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 TAF9P2-201ENST00000454958 515 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 AC089999.1-201ENST00000460336 374 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL4A1P02462 Y_RNA.670-201ENST00000516255 105 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.1□□□□□ -2.07
COL4A1P02462 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A1P02462 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A1P02462 AC009032.1-201ENST00000617574 431 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 AL589994.2-201ENST00000621124 579 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 MTND4P23-201ENST00000447723 1363 ntBASIC2.1□□□□□ -2.07
COL4A1P02462 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
COL4A1P02462 AC110774.1-201ENST00000623567 2018 ntBASIC2.09□□□□□ -2.07
COL4A1P02462 AC093716.1-201ENST00000435923 377 ntBASIC2.09□□□□□ -2.07
COL4A1P02462 SNRPGP9-201ENST00000456025 225 ntBASIC2.09□□□□□ -2.07
COL4A1P02462 RPL5P13-201ENST00000462840 709 ntBASIC2.09□□□□□ -2.07
COL4A1P02462 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
COL4A1P02462 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.09□□□□□ -2.07
COL4A1P02462 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.09□□□□□ -2.07
COL4A1P02462 AC104581.2-201ENST00000572227 430 ntBASIC2.09□□□□□ -2.07
COL4A1P02462 MTATP6P25-201ENST00000574491 261 ntBASIC2.09□□□□□ -2.07
COL4A1P02462 AC016877.3-201ENST00000606778 504 ntBASIC2.09□□□□□ -2.07
COL4A1P02462 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.09□□□□□ -2.07
COL4A1P02462 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL4A1P02462 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL4A1P02462 SNORA31-201ENST00000362607 130 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 SNORA16.1-201ENST00000364597 132 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 Y_RNA.540-201ENST00000384638 111 ntBASIC2.09□□□□□ -2.08
COL4A1P02462 AL121972.1-201ENST00000402023 252 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms