Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.07□□□□□ -1.92
BRD4O60885 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BRD4O60885 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BRD4O60885 Y_RNA.338-201ENST00000365320 114 ntBASIC3.07□□□□□ -1.92
BRD4O60885 MTCO3P12-201ENST00000416718 547 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AL121882.1-201ENST00000422893 417 ntBASIC3.07□□□□□ -1.92
BRD4O60885 HMGN2P30-201ENST00000423237 256 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.07□□□□□ -1.92
BRD4O60885 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.07□□□□□ -1.92
BRD4O60885 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.07□□□□□ -1.92
BRD4O60885 MTCYBP34-201ENST00000439552 670 ntBASIC3.07□□□□□ -1.92
BRD4O60885 TRBV26-201ENST00000456572 344 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.07□□□□□ -1.92
BRD4O60885 AC004263.1-201ENST00000479327 332 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AIG1P1-201ENST00000503376 148 ntBASIC3.07□□□□□ -1.92
BRD4O60885 MTND4P2-201ENST00000507767 1203 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.07□□□□□ -1.92
BRD4O60885 AC125611.2-201ENST00000551907 647 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AC023158.1-201ENST00000561632 1025 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.07□□□□□ -1.92
BRD4O60885 AC020895.1-201ENST00000595362 272 ntBASIC3.07□□□□□ -1.92
BRD4O60885 AC009831.4-201ENST00000620744 325 ntBASIC3.07□□□□□ -1.92
BRD4O60885 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BRD4O60885 GSTA9P-201ENST00000406231 611 ntBASIC3.06□□□□□ -1.92
BRD4O60885 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.06□□□□□ -1.92
BRD4O60885 HMGB1P11-201ENST00000413899 637 ntBASIC3.06□□□□□ -1.92
BRD4O60885 VTA1P1-201ENST00000414044 866 ntBASIC3.06□□□□□ -1.92
BRD4O60885 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.06□□□□□ -1.92
BRD4O60885 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.06□□□□□ -1.92
BRD4O60885 AC116337.1-201ENST00000509680 687 ntBASIC3.06□□□□□ -1.92
BRD4O60885 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.06□□□□□ -1.92
BRD4O60885 MTND5P28-201ENST00000438005 1594 ntBASIC3.06□□□□□ -1.92
BRD4O60885 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.05□□□□□ -1.92
BRD4O60885 AL512283.1-201ENST00000606756 1384 ntBASIC3.05□□□□□ -1.92
BRD4O60885 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.05□□□□□ -1.92
BRD4O60885 RNU6-1180P-201ENST00000364935 107 ntBASIC3.05□□□□□ -1.92
BRD4O60885 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRD4O60885 AF274854.1-201ENST00000413236 615 ntBASIC3.05□□□□□ -1.92
BRD4O60885 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.05□□□□□ -1.92
BRD4O60885 UBE2V1P6-201ENST00000430840 422 ntBASIC3.05□□□□□ -1.92
BRD4O60885 RABEPKP1-201ENST00000440529 1026 ntBASIC3.05□□□□□ -1.92
BRD4O60885 snoU13.3-201ENST00000459441 104 ntBASIC3.05□□□□□ -1.92
BRD4O60885 AC090543.1-201ENST00000492168 485 ntBASIC3.05□□□□□ -1.92
BRD4O60885 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.05□□□□□ -1.92
BRD4O60885 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.05□□□□□ -1.92
BRD4O60885 SCARNA16.3-201ENST00000516595 184 ntBASIC3.05□□□□□ -1.92
BRD4O60885 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.05□□□□□ -1.92
BRD4O60885 AC004923.2-201ENST00000529649 369 ntBASIC3.05□□□□□ -1.92
BRD4O60885 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.05□□□□□ -1.92
BRD4O60885 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
BRD4O60885 AC090740.1-201ENST00000623193 2262 ntBASIC3.05□□□□□ -1.92
BRD4O60885 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BRD4O60885 MIR221-201ENST00000385135 110 ntBASIC3.04□□□□□ -1.92
BRD4O60885 SNORA48.3-201ENST00000391081 134 ntBASIC3.04□□□□□ -1.92
BRD4O60885 RNA5SP38-201ENST00000410750 119 ntBASIC3.04□□□□□ -1.92
BRD4O60885 AL513321.1-201ENST00000441175 761 ntBASIC3.04□□□□□ -1.92
BRD4O60885 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.04□□□□□ -1.92
BRD4O60885 RN7SKP31-201ENST00000516354 278 ntBASIC3.04□□□□□ -1.92
BRD4O60885 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.04□□□□□ -1.92
BRD4O60885 CIR1P1-201ENST00000524055 1133 ntBASIC3.04□□□□□ -1.92
BRD4O60885 AP000889.2-201ENST00000532684 490 ntBASIC3.04□□□□□ -1.92
BRD4O60885 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.04□□□□□ -1.92
BRD4O60885 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.04□□□□□ -1.92
BRD4O60885 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.04□□□□□ -1.92
BRD4O60885 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.04□□□□□ -1.92
BRD4O60885 AC090751.1-201ENST00000566966 267 ntBASIC3.04□□□□□ -1.92
BRD4O60885 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.04□□□□□ -1.92
BRD4O60885 AC013562.2-201ENST00000611632 603 ntBASIC3.04□□□□□ -1.92
BRD4O60885 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.04□□□□□ -1.92
BRD4O60885 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.04□□□□□ -1.92
BRD4O60885 AC093591.3-201ENST00000634516 308 ntBASIC3.04□□□□□ -1.92
BRD4O60885 AC097714.1-201ENST00000511272 1647 ntBASIC3.04□□□□□ -1.92
BRD4O60885 AC026241.1-201ENST00000517873 2142 ntBASIC3.04□□□□□ -1.92
BRD4O60885 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.04□□□□□ -1.92
BRD4O60885 AC010733.2-201ENST00000589496 5702 ntBASIC3.04□□□□□ -1.92
BRD4O60885 AC008432.1-201ENST00000615912 1320 ntBASIC3.03□□□□□ -1.92
BRD4O60885 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
BRD4O60885 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
BRD4O60885 SNORA64-201ENST00000384674 134 ntBASIC3.03□□□□□ -1.92
BRD4O60885 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.03□□□□□ -1.92
BRD4O60885 MORF4L1P6-201ENST00000418771 268 ntBASIC3.03□□□□□ -1.92
BRD4O60885 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BRD4O60885 AL034418.1-201ENST00000448675 860 ntBASIC3.03□□□□□ -1.92
BRD4O60885 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.03□□□□□ -1.92
BRD4O60885 AL109741.2-201ENST00000455561 343 ntBASIC3.03□□□□□ -1.92
BRD4O60885 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.03□□□□□ -1.92
BRD4O60885 HMGN1P8-201ENST00000463578 288 ntBASIC3.03□□□□□ -1.92
BRD4O60885 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.03□□□□□ -1.92
BRD4O60885 RPPH1-2P-201ENST00000516688 293 ntBASIC3.03□□□□□ -1.92
BRD4O60885 OR4V1P-201ENST00000525394 1140 ntBASIC3.03□□□□□ -1.92
BRD4O60885 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.03□□□□□ -1.92
BRD4O60885 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.03□□□□□ -1.92
BRD4O60885 MIR4498-201ENST00000577599 66 ntBASIC3.03□□□□□ -1.92
BRD4O60885 COX6CP3-201ENST00000580869 223 ntBASIC3.03□□□□□ -1.92
BRD4O60885 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.03□□□□□ -1.92
BRD4O60885 AC011460.1-201ENST00000636268 1834 ntBASIC3.03□□□□□ -1.92
BRD4O60885 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
BRD4O60885 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.03□□□□□ -1.93
BRD4O60885 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
BRD4O60885 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms