Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC116165.2-201ENST00000616705 206 ntBASIC3.39□□□□□ -1.87
PRKNO60260 AC108479.2-201ENST00000617314 601 ntBASIC3.39□□□□□ -1.87
PRKNO60260 AL596245.1-201ENST00000618994 362 ntBASIC3.39□□□□□ -1.87
PRKNO60260 AC040168.1-201ENST00000623594 991 ntBASIC3.39□□□□□ -1.87
PRKNO60260 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.39□□□□□ -1.87
PRKNO60260 AP000553.6-201ENST00000641242 118 ntBASIC3.39□□□□□ -1.87
PRKNO60260 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRKNO60260 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.39□□□□□ -1.87
PRKNO60260 AC106871.1-201ENST00000568324 3102 ntBASIC3.39□□□□□ -1.87
PRKNO60260 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRKNO60260 AC008725.1-201ENST00000605123 2263 ntBASIC3.39□□□□□ -1.87
PRKNO60260 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRKNO60260 AP001486.2-201ENST00000561652 5113 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC092125.1-201ENST00000562568 1995 ntBASIC3.38□□□□□ -1.87
PRKNO60260 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PRKNO60260 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PRKNO60260 SNORD9-201ENST00000362566 104 ntBASIC3.38□□□□□ -1.87
PRKNO60260 RNU6-263P-201ENST00000363811 107 ntBASIC3.38□□□□□ -1.87
PRKNO60260 RNU6-761P-201ENST00000384148 107 ntBASIC3.38□□□□□ -1.87
PRKNO60260 MIR23A-201ENST00000385245 73 ntBASIC3.38□□□□□ -1.87
PRKNO60260 MIR1250-201ENST00000408098 113 ntBASIC3.38□□□□□ -1.87
PRKNO60260 RPS3AP3-201ENST00000411933 242 ntBASIC3.38□□□□□ -1.87
PRKNO60260 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKNO60260 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKNO60260 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PRKNO60260 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.38□□□□□ -1.87
PRKNO60260 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 RPS3AP46-201ENST00000448352 682 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKNO60260 SRRM1P2-201ENST00000464531 1192 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC138853.1-201ENST00000503549 823 ntBASIC3.38□□□□□ -1.87
PRKNO60260 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 Vault.1-201ENST00000516474 102 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKNO60260 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PRKNO60260 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 CENPUP2-201ENST00000555897 1186 ntBASIC3.38□□□□□ -1.87
PRKNO60260 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKNO60260 EIF1P4-201ENST00000572664 335 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC099489.2-201ENST00000574976 260 ntBASIC3.38□□□□□ -1.87
PRKNO60260 SNORA51-201ENST00000606420 132 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC108747.1-201ENST00000609508 535 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AP001506.1-201ENST00000615444 211 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKNO60260 C2orf27A-204ENST00000623058 969 ntBASIC3.38□□□□□ -1.87
PRKNO60260 AC091925.2-201ENST00000625059 256 ntBASIC3.38□□□□□ -1.87
PRKNO60260 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKNO60260 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKNO60260 AC009093.8-201ENST00000641769 292 ntBASIC3.38□□□□□ -1.87
PRKNO60260 NMD3P1-201ENST00000439704 1488 ntBASIC3.38□□□□□ -1.87
PRKNO60260 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKNO60260 AC090337.1-201ENST00000579651 2074 ntBASIC3.38□□□□□ -1.87
PRKNO60260 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PRKNO60260 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKNO60260 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRKNO60260 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKNO60260 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKNO60260 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKNO60260 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
PRKNO60260 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKNO60260 AC092447.10-201ENST00000620607 1652 ntBASIC3.37□□□□□ -1.87
PRKNO60260 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
PRKNO60260 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKNO60260 Y_RNA.46-201ENST00000362695 102 ntBASIC3.37□□□□□ -1.87
PRKNO60260 RNA5SP258-201ENST00000362750 119 ntBASIC3.37□□□□□ -1.87
PRKNO60260 RNU6-97P-201ENST00000363387 104 ntBASIC3.37□□□□□ -1.87
PRKNO60260 Y_RNA.516-201ENST00000384541 124 ntBASIC3.37□□□□□ -1.87
PRKNO60260 RPS3AP36-201ENST00000398190 775 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKNO60260 BX890604.2-201ENST00000427883 474 ntBASIC3.37□□□□□ -1.87
PRKNO60260 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKNO60260 CKS1BP5-201ENST00000434172 273 ntBASIC3.37□□□□□ -1.87
PRKNO60260 HSPD1P21-201ENST00000436541 245 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.37□□□□□ -1.87
PRKNO60260 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PRKNO60260 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.37□□□□□ -1.87
PRKNO60260 VN1R34P-201ENST00000447387 883 ntBASIC3.37□□□□□ -1.87
PRKNO60260 PPIAP3-201ENST00000450588 505 ntBASIC3.37□□□□□ -1.87
PRKNO60260 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.37□□□□□ -1.87
PRKNO60260 AC146507.1-201ENST00000468335 354 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC106707.2-201ENST00000484182 374 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKNO60260 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKNO60260 RPL37P25-201ENST00000507308 276 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKNO60260 RN7SKP18-201ENST00000516005 275 ntBASIC3.37□□□□□ -1.87
PRKNO60260 SNORA18.6-201ENST00000516792 115 ntBASIC3.37□□□□□ -1.87
PRKNO60260 RNU6-1003P-201ENST00000517099 105 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKNO60260 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKNO60260 OR4P1P-201ENST00000530808 1136 ntBASIC3.37□□□□□ -1.87
PRKNO60260 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKNO60260 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKNO60260 CCNG2P1-201ENST00000549521 1000 ntBASIC3.37□□□□□ -1.87
PRKNO60260 RPL21P5-201ENST00000554662 472 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms