Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AP003122.4-201ENST00000530980 758 ntBASIC3.75□□□□□ -1.81
LDB2O43679 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LDB2O43679 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB2O43679 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.75□□□□□ -1.81
LDB2O43679 TPRKBP2-201ENST00000565969 475 ntBASIC3.75□□□□□ -1.81
LDB2O43679 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB2O43679 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 VN1R79P-201ENST00000593540 513 ntBASIC3.75□□□□□ -1.81
LDB2O43679 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
LDB2O43679 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB2O43679 AC073534.2-201ENST00000620377 381 ntBASIC3.75□□□□□ -1.81
LDB2O43679 CR392039.5-201ENST00000623201 510 ntBASIC3.75□□□□□ -1.81
LDB2O43679 PISRT1-201ENST00000626175 531 ntBASIC3.75□□□□□ -1.81
LDB2O43679 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDB2O43679 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
LDB2O43679 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB2O43679 ZNF33CP-201ENST00000432492 2030 ntBASIC3.75□□□□□ -1.81
LDB2O43679 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDB2O43679 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDB2O43679 MAPK10-372ENST00000641954 3413 ntBASIC3.74□□□□□ -1.81
LDB2O43679 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDB2O43679 FRG1BP-201ENST00000278882 761 ntBASIC3.74□□□□□ -1.81
LDB2O43679 OR4G2P-201ENST00000328113 903 ntBASIC3.74□□□□□ -1.81
LDB2O43679 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
LDB2O43679 Y_RNA.234-201ENST00000364409 97 ntBASIC3.74□□□□□ -1.81
LDB2O43679 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
LDB2O43679 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LDB2O43679 RNU2-15P-201ENST00000410692 191 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB2O43679 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.74□□□□□ -1.81
LDB2O43679 AL139247.1-201ENST00000422768 325 ntBASIC3.74□□□□□ -1.81
LDB2O43679 PSMA2P3-201ENST00000429685 675 ntBASIC3.74□□□□□ -1.81
LDB2O43679 FTH1P6-201ENST00000430768 320 ntBASIC3.74□□□□□ -1.81
LDB2O43679 EZH2P1-201ENST00000431167 291 ntBASIC3.74□□□□□ -1.81
LDB2O43679 GOT2P5-201ENST00000433995 546 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB2O43679 RPL17P49-201ENST00000443728 411 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB2O43679 VN1R34P-201ENST00000447387 883 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AL359893.1-201ENST00000447628 1580 ntBASIC3.74□□□□□ -1.81
LDB2O43679 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB2O43679 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB2O43679 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDB2O43679 AP1S2P1-201ENST00000457344 379 ntBASIC3.74□□□□□ -1.81
LDB2O43679 RPS3AP17-201ENST00000472594 777 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC004924.1-201ENST00000480160 781 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB2O43679 AC006390.1-201ENST00000508068 283 ntBASIC3.74□□□□□ -1.81
LDB2O43679 MTCO3P44-201ENST00000510977 541 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC011352.1-201ENST00000512300 793 ntBASIC3.74□□□□□ -1.81
LDB2O43679 RN7SKP234-201ENST00000517173 224 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.74□□□□□ -1.81
LDB2O43679 AC135001.1-201ENST00000544546 283 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.74□□□□□ -1.81
LDB2O43679 AC034268.2-201ENST00000571784 482 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.74□□□□□ -1.81
LDB2O43679 NRBF2P1-201ENST00000587407 859 ntBASIC3.74□□□□□ -1.81
LDB2O43679 HMGN1P30-201ENST00000589286 268 ntBASIC3.74□□□□□ -1.81
LDB2O43679 CKS1BP3-201ENST00000600888 237 ntBASIC3.74□□□□□ -1.81
LDB2O43679 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB2O43679 OR5H6-203ENST00000642105 978 ntBASIC3.74□□□□□ -1.81
LDB2O43679 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB2O43679 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LDB2O43679 PABPC1P7-201ENST00000413177 1513 ntBASIC3.74□□□□□ -1.81
LDB2O43679 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDB2O43679 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDB2O43679 U8.3-201ENST00000363321 132 ntBASIC3.73□□□□□ -1.81
LDB2O43679 RNY4P34-201ENST00000364779 95 ntBASIC3.73□□□□□ -1.81
LDB2O43679 RNU6-1207P-201ENST00000384343 107 ntBASIC3.73□□□□□ -1.81
LDB2O43679 U3.29-201ENST00000391296 212 ntBASIC3.73□□□□□ -1.81
LDB2O43679 RPS3AP36-201ENST00000398190 775 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AL359704.1-201ENST00000411586 781 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB2O43679 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB2O43679 AL353777.1-201ENST00000425552 326 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB2O43679 NDUFB1P1-201ENST00000435191 180 ntBASIC3.73□□□□□ -1.81
LDB2O43679 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AL133162.1-201ENST00000463228 453 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AC091153.1-201ENST00000466297 402 ntBASIC3.73□□□□□ -1.81
LDB2O43679 MTND1P3-201ENST00000484956 952 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AC012170.1-201ENST00000495139 359 ntBASIC3.73□□□□□ -1.81
LDB2O43679 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB2O43679 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
LDB2O43679 HIGD1AP3-201ENST00000515857 278 ntBASIC3.73□□□□□ -1.81
LDB2O43679 RNU2-46P-201ENST00000517038 113 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AC022616.6-201ENST00000520479 119 ntBASIC3.73□□□□□ -1.81
LDB2O43679 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB2O43679 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB2O43679 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB2O43679 AC009101.1-201ENST00000568135 242 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AC011468.4-201ENST00000603942 409 ntBASIC3.73□□□□□ -1.81
LDB2O43679 AC112230.1-201ENST00000604342 547 ntBASIC3.73□□□□□ -1.81
LDB2O43679 RNU6-87P-201ENST00000607561 108 ntBASIC3.73□□□□□ -1.81
LDB2O43679 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms