Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM2O43300 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM2O43300 MIR5680-201ENST00000577577 84 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 MIR4325-201ENST00000583049 90 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM2O43300 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM2O43300 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM2O43300 AL606834.2-201ENST00000602954 668 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AL353778.1-201ENST00000603149 408 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AC009220.3-201ENST00000604318 586 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AL592221.1-201ENST00000605266 382 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AL158042.1-201ENST00000605338 460 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRTM2O43300 AL162274.2-201ENST00000614406 332 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AC009318.4-201ENST00000620496 486 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AC097520.1-201ENST00000624435 385 ntBASIC3.16□□□□□ -1.9
LRRTM2O43300 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM2O43300 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRTM2O43300 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRTM2O43300 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRTM2O43300 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRTM2O43300 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 U3.39-201ENST00000408569 239 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM2O43300 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AC010099.3-201ENST00000423896 409 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM2O43300 USP9YP36-201ENST00000424581 829 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC079780.1-201ENST00000428259 207 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRTM2O43300 RPS25P9-201ENST00000435591 252 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AL606662.1-201ENST00000445763 553 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 MTND1P31-201ENST00000449206 961 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 ANKRD26P4-201ENST00000455755 950 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AC068587.2-201ENST00000478386 781 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC068724.1-201ENST00000487100 792 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC092185.1-201ENST00000491371 97 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 RN7SL504P-201ENST00000494496 287 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM2O43300 RNU6-1129P-201ENST00000515964 104 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM2O43300 LARP7P3-201ENST00000579888 337 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM2O43300 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AC112220.3-201ENST00000605502 502 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC124312.4-201ENST00000605533 310 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AC120349.3-201ENST00000624377 529 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 AC019226.2-201ENST00000625973 424 ntBASIC3.15□□□□□ -1.91
LRRTM2O43300 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM2O43300 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRTM2O43300 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM2O43300 MTCO1P23-201ENST00000415223 1526 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AP000526.1-201ENST00000603308 1388 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
LRRTM2O43300 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM2O43300 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AL391994.1-201ENST00000254724 282 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 RNA5SP374-201ENST00000362939 125 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM2O43300 PIGPP2-201ENST00000411569 458 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 TIMM9P2-201ENST00000419324 266 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 COTL1P1-201ENST00000422309 375 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AL357552.1-201ENST00000445254 415 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 RSL24D1P3-201ENST00000449255 495 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC098826.2-201ENST00000452011 651 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 USP9YP34-201ENST00000453983 808 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AP001992.1-205ENST00000462248 379 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 RPS27P29-201ENST00000463110 252 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 MTND1P16-201ENST00000465177 898 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 RPS3AP14-201ENST00000483907 780 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.14□□□□□ -1.91
LRRTM2O43300 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LRRTM2O43300 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 RNU6-583P-201ENST00000516012 92 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AP001804.3-201ENST00000525146 880 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC008127.2-201ENST00000549925 1075 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms