Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC109445.1-201ENST00000512356 383 ntBASIC3.25□□□□□ -1.89
E2F3O00716 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
E2F3O00716 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
E2F3O00716 RN7SKP31-201ENST00000516354 278 ntBASIC3.25□□□□□ -1.89
E2F3O00716 RNU1-103P-201ENST00000516502 125 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AC239860.2-201ENST00000525886 270 ntBASIC3.25□□□□□ -1.89
E2F3O00716 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.25□□□□□ -1.89
E2F3O00716 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
E2F3O00716 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
E2F3O00716 AC023050.2-201ENST00000544968 387 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.25□□□□□ -1.89
E2F3O00716 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.25□□□□□ -1.89
E2F3O00716 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.25□□□□□ -1.89
E2F3O00716 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.25□□□□□ -1.89
E2F3O00716 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.25□□□□□ -1.89
E2F3O00716 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.25□□□□□ -1.89
E2F3O00716 MIR5186-201ENST00000577504 120 ntBASIC3.25□□□□□ -1.89
E2F3O00716 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.25□□□□□ -1.89
E2F3O00716 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.25□□□□□ -1.89
E2F3O00716 VN1R78P-201ENST00000597393 564 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
E2F3O00716 AC009220.3-201ENST00000604318 586 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AC080013.3-201ENST00000606839 578 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AC131235.4-201ENST00000609288 620 ntBASIC3.25□□□□□ -1.89
E2F3O00716 TUSC7.1-201ENST00000610969 165 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.25□□□□□ -1.89
E2F3O00716 AC009464.1-201ENST00000615731 469 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AL356585.4-201ENST00000623078 1229 ntBASIC3.25□□□□□ -1.89
E2F3O00716 AC116618.1-201ENST00000634617 774 ntBASIC3.25□□□□□ -1.89
E2F3O00716 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
E2F3O00716 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
E2F3O00716 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.24□□□□□ -1.89
E2F3O00716 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
E2F3O00716 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
E2F3O00716 CDR1-202ENST00000625883 1485 ntBASIC3.24□□□□□ -1.89
E2F3O00716 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
E2F3O00716 FAM133CP-201ENST00000332869 704 ntBASIC3.24□□□□□ -1.89
E2F3O00716 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
E2F3O00716 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
E2F3O00716 FAT1P1-201ENST00000406588 507 ntBASIC3.24□□□□□ -1.89
E2F3O00716 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.24□□□□□ -1.89
E2F3O00716 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 LUZP4P1-201ENST00000415420 344 ntBASIC3.24□□□□□ -1.89
E2F3O00716 HSFY4P-201ENST00000415994 1181 ntBASIC3.24□□□□□ -1.89
E2F3O00716 SSXP9-201ENST00000417503 292 ntBASIC3.24□□□□□ -1.89
E2F3O00716 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.24□□□□□ -1.89
E2F3O00716 BX842559.1-201ENST00000419615 532 ntBASIC3.24□□□□□ -1.89
E2F3O00716 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AL139421.1-201ENST00000423010 169 ntBASIC3.24□□□□□ -1.89
E2F3O00716 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.24□□□□□ -1.89
E2F3O00716 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.24□□□□□ -1.89
E2F3O00716 AC098826.2-201ENST00000452011 651 ntBASIC3.24□□□□□ -1.89
E2F3O00716 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.24□□□□□ -1.89
E2F3O00716 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 RNU5A-4P-201ENST00000516588 111 ntBASIC3.24□□□□□ -1.89
E2F3O00716 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
E2F3O00716 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.24□□□□□ -1.89
E2F3O00716 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
E2F3O00716 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
E2F3O00716 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC012493.2-201ENST00000595083 291 ntBASIC3.24□□□□□ -1.89
E2F3O00716 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.24□□□□□ -1.89
E2F3O00716 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AC012443.1-201ENST00000605605 231 ntBASIC3.24□□□□□ -1.89
E2F3O00716 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.24□□□□□ -1.89
E2F3O00716 AL356321.1-201ENST00000621360 228 ntBASIC3.24□□□□□ -1.89
E2F3O00716 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
E2F3O00716 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.24□□□□□ -1.89
E2F3O00716 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
E2F3O00716 CUL1P1-201ENST00000509510 2425 ntBASIC3.24□□□□□ -1.89
E2F3O00716 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
E2F3O00716 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
E2F3O00716 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
E2F3O00716 AL513185.3-201ENST00000433335 1300 ntBASIC3.23□□□□□ -1.89
E2F3O00716 AC005539.1-201ENST00000443768 1479 ntBASIC3.23□□□□□ -1.89
E2F3O00716 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
E2F3O00716 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.23□□□□□ -1.89
E2F3O00716 RNU1-70P-201ENST00000362618 164 ntBASIC3.23□□□□□ -1.89
E2F3O00716 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
E2F3O00716 RNU6-83P-201ENST00000384568 112 ntBASIC3.23□□□□□ -1.89
E2F3O00716 MIR493-201ENST00000385254 89 ntBASIC3.23□□□□□ -1.89
E2F3O00716 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
E2F3O00716 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
E2F3O00716 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
E2F3O00716 AL136372.1-201ENST00000403060 228 ntBASIC3.23□□□□□ -1.89
E2F3O00716 RPL5P18-201ENST00000406671 891 ntBASIC3.23□□□□□ -1.89
E2F3O00716 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.23□□□□□ -1.89
E2F3O00716 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
E2F3O00716 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.23□□□□□ -1.89
E2F3O00716 USP9YP11-201ENST00000427537 717 ntBASIC3.23□□□□□ -1.89
E2F3O00716 BX890604.2-201ENST00000427883 474 ntBASIC3.23□□□□□ -1.89
E2F3O00716 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms