Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC026436.1-201ENST00000510537 270 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC091965.2-201ENST00000512324 613 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 OR5AK3P-201ENST00000527486 1297 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AP005639.2-201ENST00000527592 928 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 CYCSP2-201ENST00000558168 301 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR5571-201ENST00000577998 113 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC010928.2-201ENST00000588017 287 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC021749.1-201ENST00000604322 607 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC025588.2-201ENST00000604851 466 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC013468.1-201ENST00000608680 598 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC104307.1-201ENST00000616142 196 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR6886-201ENST00000619864 61 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC092608.2-201ENST00000624427 218 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR1291-201ENST00000627649 87 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 MTND2P41-201ENST00000637599 773 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 ADAM3A-203ENST00000461344 2157 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC010329.5-201ENST00000623497 2174 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU4-23P-201ENST00000362839 140 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR490-201ENST00000384865 128 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 SNORA48.5-201ENST00000391143 135 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-1197P-201ENST00000391183 107 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 SSXP10-201ENST00000402595 565 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 TATDN1P1-201ENST00000414123 891 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 EEF1A1P41-201ENST00000414667 207 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AIMP1P2-201ENST00000425294 312 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 HMGN2P31-201ENST00000432430 273 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC092573.2-201ENST00000434546 243 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 MTND2P19-201ENST00000449129 1012 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC087884.1-201ENST00000469738 328 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL7P49-201ENST00000471402 708 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 NDUFA5P9-201ENST00000472609 340 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 RN7SKP24-201ENST00000515888 284 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 SCARNA17.1-201ENST00000516211 143 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 SCARNA17.2-201ENST00000516334 143 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 MTCYBP20-201ENST00000524239 1129 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 FAM92A1P1-201ENST00000528023 890 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 CBX3P7-201ENST00000532876 502 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 CYCSP39-201ENST00000565821 309 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC009303.3-201ENST00000591103 736 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC006539.2-201ENST00000601729 572 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC126118.1-201ENST00000607744 628 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 SCARNA17.4-201ENST00000614296 143 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AL121772.2-201ENST00000614331 297 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR6737-201ENST00000617385 70 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AL158801.5-201ENST00000623123 465 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 AC026422.1-201ENST00000623961 452 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 OR4G2P-202ENST00000641004 1759 ntBASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CHKB-CPT1BH3BT56 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU1-112P-201ENST00000364401 164 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 SNORA23-201ENST00000365128 182 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-167P-201ENST00000384292 106 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR27B-201ENST00000385129 97 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR9-1-201ENST00000385198 89 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR147B-201ENST00000390185 80 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AL356057.3-201ENST00000402607 340 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 PTGES3P2-201ENST00000407942 482 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-955P-201ENST00000410497 104 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL27AP8-201ENST00000424277 446 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 SDR42E1P3-201ENST00000438345 502 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 BTF3P5-201ENST00000457252 467 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC006445.1-201ENST00000491925 405 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms