Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-492P-201ENST00000363035 104 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 Y_RNA.169-201ENST00000363745 96 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-115P-201ENST00000364310 107 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-157P-201ENST00000383957 107 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-1226P-201ENST00000384317 107 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 MIR887-201ENST00000401258 79 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AL138880.1-201ENST00000405824 642 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RPL7P46-201ENST00000425129 740 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 SAR1AP4-201ENST00000429225 591 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RPS25P9-201ENST00000435591 252 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AL117351.1-201ENST00000438864 766 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AC007327.1-201ENST00000447461 264 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 SSXP4-201ENST00000451349 245 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 NIPA2P5-201ENST00000452282 464 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 OR6C5P-201ENST00000452388 923 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AC104308.1-201ENST00000454621 333 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AC091826.1-201ENST00000514065 313 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 SCGB1D5P-201ENST00000515134 247 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AC005832.3-201ENST00000537929 631 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AL355836.1-201ENST00000555951 870 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 DUXAP1-201ENST00000556632 463 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AL157394.1-201ENST00000562983 1224 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 MIR3200-201ENST00000580767 85 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 ZNF861P-201ENST00000588126 639 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AL357094.1-201ENST00000603845 844 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 YPEL5P2-201ENST00000605553 359 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 AP003485.2-201ENST00000623636 610 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 MKKS-204ENST00000639674 192 ntBASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM49D1C9J1S8 API5P2-201ENST00000397055 1498 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-1243P-201ENST00000364028 107 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 SUGT1P1-201ENST00000379514 476 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 SNORA26.7-201ENST00000391288 122 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 RPL23AP29-201ENST00000397284 453 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 RPL5P18-201ENST00000406671 891 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AL035410.1-201ENST00000427409 427 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 USP9YP11-201ENST00000427537 717 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 MTND3P1-201ENST00000441336 220 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 TRIM60P18-201ENST00000441518 828 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC104073.1-201ENST00000451988 151 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 TRGVB-201ENST00000453257 471 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC087879.1-201ENST00000474343 374 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 VPS26AP1-201ENST00000483197 979 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC026427.2-201ENST00000506228 536 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 RN7SKP57-201ENST00000517248 293 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 IGKV2D-36-201ENST00000518643 226 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 VN1R90P-201ENST00000595717 726 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC078899.3-201ENST00000599065 212 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC103881.1-201ENST00000603476 538 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC124312.4-201ENST00000605533 310 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 TUSC7.1-201ENST00000610969 165 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AC109454.4-201ENST00000623411 649 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 CR381653.2-201ENST00000624041 768 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms