Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL138825.1-201ENST00000618587 192 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC067931.1-201ENST00000624190 671 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL355480.1-201ENST00000629041 99 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL606534.2-204ENST00000635008 178 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AC126323.6-202ENST00000568092 3511 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 EOGT-210ENST00000615922 1931 ntBASIC4.58□□□□□ -1.68
SHISA3A0PJX4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SHISA3A0PJX4 SOCS5P3-201ENST00000425115 1576 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 LINC01963-201ENST00000562038 3148 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC112198.2-201ENST00000426589 6996 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 RNA5SP223-201ENST00000365174 120 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 RNU6-823P-201ENST00000391042 103 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 HMGB1P20-201ENST00000402555 677 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC011933.1-201ENST00000413334 321 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 RPL36AP10-201ENST00000421785 322 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 SRSF1P1-201ENST00000424058 520 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AL356981.1-201ENST00000454879 684 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC068781.1-201ENST00000488231 618 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC092436.3-201ENST00000511788 257 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 RNU6-615P-201ENST00000516065 106 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 RNU4-77P-201ENST00000516692 156 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC007991.1-201ENST00000522680 631 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 BNIP3P1-201ENST00000547295 580 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 MIR5692A1-201ENST00000580523 69 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC012669.1-201ENST00000603209 283 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC008814.1-201ENST00000603797 406 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC107871.2-201ENST00000612894 502 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 U73479.1-201ENST00000618062 168 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 SALL4P2-201ENST00000423288 2910 ntBASIC4.57□□□□□ -1.68
SHISA3A0PJX4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHISA3A0PJX4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AC139769.1-204ENST00000472297 1931 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AC097063.1-201ENST00000426714 1797 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 RNU6-263P-201ENST00000363811 107 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 RNU6-379P-201ENST00000363813 104 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AL078599.1-201ENST00000402075 293 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AL035079.1-201ENST00000405210 287 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 EIF4EP1-201ENST00000422311 642 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 GSTM5P1-201ENST00000434751 660 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AL590399.6-201ENST00000446396 307 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 RPL29P29-201ENST00000448725 423 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 RPL21P41-201ENST00000459863 264 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms