Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNA5SP283-201ENST00000365604 119 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC068538.1-201ENST00000376856 336 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-1103P-201ENST00000384150 107 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 MIR124-3-201ENST00000384866 87 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 MIR19A-201ENST00000384878 82 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 USP9YP36-201ENST00000424581 829 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 ISCA1P6-201ENST00000427740 390 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 ARPC3P1-201ENST00000437218 533 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC079448.1-201ENST00000449377 373 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 MTCO3P20-201ENST00000454926 688 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 MTND1P12-201ENST00000455231 147 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 MTCO2P29-201ENST00000465212 189 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 RBM43P1-201ENST00000476891 1081 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AF186190.1-201ENST00000517470 480 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 DEFB108A-201ENST00000530110 222 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC087481.2-201ENST00000565492 330 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC090616.5-202ENST00000582111 297 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 KLKP1-201ENST00000595979 403 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC012669.1-201ENST00000603209 283 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC006254.3-201ENST00000603353 884 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AL031176.1-201ENST00000604554 466 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AL590392.1-201ENST00000604960 446 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 OR6R2P-201ENST00000609216 300 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC007684.1-201ENST00000609671 477 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AL592295.2-201ENST00000612578 206 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 AC024560.2-201ENST00000507981 1497 ntBASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV7S3A2A0A539 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC027290.2-201ENST00000623210 18662 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RNU5E-1-201ENST00000362477 120 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-1078P-201ENST00000364522 103 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RNA5SP424-201ENST00000390988 115 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RPS3AP36-201ENST00000398190 775 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 GSTA9P-201ENST00000406231 611 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-712P-201ENST00000410558 100 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RNU6-195P-201ENST00000411352 109 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC099677.1-201ENST00000420575 175 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 BEND7P1-201ENST00000422058 457 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 FTH1P1-201ENST00000437933 532 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RAC1P7-201ENST00000445367 377 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC010655.1-201ENST00000449336 292 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC006480.1-201ENST00000449887 378 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC009220.1-201ENST00000451614 275 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RPL7P23-201ENST00000493874 747 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RN7SL323P-201ENST00000494712 295 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 HMGB1P29-201ENST00000505659 499 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 MED28P5-201ENST00000528254 438 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 DEFB109D-201ENST00000529497 240 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC018630.1-201ENST00000541376 925 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 MIR4738-201ENST00000579134 87 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 KC877982.1-201ENST00000602313 470 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC010680.3-201ENST00000604215 520 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC083809.1-201ENST00000615051 472 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC009268.2-201ENST00000621925 457 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC068880.5-201ENST00000624331 290 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC124864.2-201ENST00000624736 186 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AL159972.1-201ENST00000625150 448 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 RNA5SP196-201ENST00000625967 102 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 AC244258.1-201ENST00000637553 1071 ntBASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.78□□□□□ -1.8
TCRBV7S3A2A0A539 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms