Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 Y_RNA.192-201ENST00000363977 102 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 RNU2-52P-201ENST00000410680 190 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC092447.6-201ENST00000414578 210 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 USP9YP36-201ENST00000424581 829 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC019097.1-201ENST00000424783 735 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 USP9YP11-201ENST00000427537 717 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 MTCYBP31-201ENST00000438855 1122 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 RPL39P6-201ENST00000448289 150 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AL109933.2-201ENST00000452651 260 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 RN7SL330P-201ENST00000469709 307 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC003982.1-202ENST00000469928 248 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 MTCYBP17-201ENST00000503579 789 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 HMGB1P28-201ENST00000507778 552 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 MTCO2P32-201ENST00000514865 403 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC109635.4-202ENST00000531666 412 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 MIR3162-201ENST00000581818 82 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC069304.2-201ENST00000605154 435 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 OR2AS2P-201ENST00000606902 342 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AL590282.1-201ENST00000610379 1136 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC018755.4-201ENST00000619715 454 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 Z99129.2-201ENST00000619967 314 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 MIR1322-201ENST00000638013 71 ntBASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMIM28A0A1B0GU29 CDR1-202ENST00000625883 1485 ntBASIC2.96□□□□□ -1.93
SMIM28A0A1B0GU29 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
SMIM28A0A1B0GU29 GDI2P1-201ENST00000429312 1336 ntBASIC2.96□□□□□ -1.93
SMIM28A0A1B0GU29 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 MIR181A2-201ENST00000384863 110 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-584P-201ENST00000410350 95 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AL451074.5-201ENST00000415894 435 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 USP9YP24-201ENST00000434374 697 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 RPS29P6-201ENST00000438196 145 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC092427.1-201ENST00000439177 601 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 USP9YP17-201ENST00000444617 696 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC007327.1-201ENST00000447461 264 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 RPL7P52-201ENST00000449200 742 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 USP9YP34-201ENST00000453983 808 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 RPS20P24-201ENST00000457473 361 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC026410.2-201ENST00000460281 156 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC010285.1-201ENST00000470580 392 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 TMEM251P1-201ENST00000503717 318 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 SNORA31.20-201ENST00000517111 133 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 MTND2P32-201ENST00000521584 1038 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC007954.1-201ENST00000554198 494 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AGGF1P5-201ENST00000567900 919 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 MAGOH2P-202ENST00000584384 429 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC083760.1-201ENST00000589621 670 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC012669.1-201ENST00000603209 283 ntBASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMIM28A0A1B0GU29 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AP002907.1-201ENST00000606361 1430 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 RPL9P7-201ENST00000330965 580 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 MIR26A1-201ENST00000362205 77 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-1249P-201ENST00000363237 111 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms