Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 HMGB1P17-201ENST00000403495 628 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AL021407.1-201ENST00000404531 386 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC096664.2-201ENST00000411843 406 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 BX323014.1-201ENST00000412876 237 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 RPL7P30-201ENST00000420888 709 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AL512649.1-201ENST00000428997 581 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 SETP5-201ENST00000437270 562 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 MTND4P6-201ENST00000438297 472 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 USP9YP34-201ENST00000453983 808 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 MEMO1P3-201ENST00000459811 302 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 SETP11-201ENST00000473027 690 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC114981.1-201ENST00000503897 678 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 RNU6-150P-201ENST00000516237 95 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 RN7SKP289-201ENST00000517244 295 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 MIR4276-201ENST00000584832 70 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 WISP1-OT1-201ENST00000602893 642 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC090116.1-201ENST00000615679 446 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC091965.5-201ENST00000624785 342 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC092192.1-201ENST00000633154 1018 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AP003399.1-201ENST00000637534 361 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 AC099063.3-201ENST00000642066 185 ntBASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1G3Q9Y6M4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSNK1G3Q9Y6M4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSNK1G3Q9Y6M4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 RNU6-660P-201ENST00000364566 109 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 RPL31P1-201ENST00000398116 372 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL031577.2-201ENST00000404133 280 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 RNU6-920P-201ENST00000410926 92 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC019178.2-201ENST00000423595 505 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL590103.1-201ENST00000434488 307 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 MTND4P32-201ENST00000437189 1237 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 MTND2P4-201ENST00000445034 1004 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC087312.1-201ENST00000471411 480 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC072039.1-201ENST00000477611 581 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 MTCO3P44-201ENST00000510977 541 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 RNU4-60P-201ENST00000517239 135 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 OR4R3P-201ENST00000525084 838 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC239860.2-201ENST00000525886 270 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC007954.1-201ENST00000554198 494 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 ZNF192P1-203ENST00000565888 810 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC012435.1-202ENST00000568772 240 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL606834.2-201ENST00000602954 668 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AC091931.1-201ENST00000623488 728 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL356596.1-201ENST00000624230 379 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 CYP3A51P-201ENST00000633513 256 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 MIR4496-201ENST00000635896 61 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 AL445523.1-201ENST00000451184 1362 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 DDX43P2-201ENST00000604753 1354 ntBASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSNK1G3Q9Y6M4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.32□□□□□ -1.88
CSNK1G3Q9Y6M4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.32□□□□□ -1.88
CSNK1G3Q9Y6M4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms