Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AP001284.1-201ENST00000528393 2118 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RNU6-1325P-201ENST00000364905 105 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RN7SKP186-201ENST00000365371 303 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 MIR433-201ENST00000384837 93 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 CYCSP12-201ENST00000437729 300 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AC091179.1-201ENST00000461606 579 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AC008945.1-201ENST00000505144 499 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RNU1-86P-201ENST00000516108 154 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RNU1-107P-201ENST00000516617 154 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 IGKV3D-34-201ENST00000522638 302 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AC018442.3-201ENST00000523025 183 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RPL23AP78-201ENST00000599928 470 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RMST_4.1-201ENST00000616886 107 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AC008785.1-201ENST00000624475 456 ntBASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB3Q9Y5E6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 UBE2WP1-201ENST00000362030 340 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 RNU6-1301P-201ENST00000362724 104 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.534-201ENST00000384599 112 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 RNU6-1179P-201ENST00000384667 107 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 MIR186-201ENST00000384988 86 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AL096701.2-201ENST00000416920 238 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC073587.1-201ENST00000447093 876 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 ACA64.1-201ENST00000459171 127 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 snoU13.29-201ENST00000459370 104 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC092865.4-201ENST00000477936 615 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC130365.2-201ENST00000525882 1201 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC079905.1-201ENST00000549280 475 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 MIR4675-201ENST00000577898 77 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 NF1P5-201ENST00000588287 448 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC024884.1-201ENST00000620583 399 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 IGHVIII-44-202ENST00000636235 289 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 AC092079.1-201ENST00000558620 1985 ntBASIC5.97□□□□□ -1.45
PCDHB3Q9Y5E6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
PCDHB3Q9Y5E6 AC027228.2-201ENST00000567141 2154 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 MAPK10-338ENST00000641647 3362 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF826P-207ENST00000622273 1910 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AL731532.1-201ENST00000623972 4236 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 U3.6-201ENST00000363622 211 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 RN7SKP227-201ENST00000364445 330 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms