Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AL355812.1-201ENST00000603215 216 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC006963.1-201ENST00000624003 1052 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC241585.2-209ENST00000638217 143 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 PABPC1P9-201ENST00000426076 1612 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 RNU6-335P-201ENST00000364563 113 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RNU4-74P-201ENST00000411280 161 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 SNRPEP4-201ENST00000435815 279 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 OR51B8P-201ENST00000449892 769 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 FDX1P2-201ENST00000450769 375 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AP002345.1-201ENST00000456493 928 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AP000852.1-201ENST00000472460 573 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC104689.1-201ENST00000473356 768 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC010625.1-201ENST00000511296 403 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RNU6-711P-201ENST00000517255 106 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 C1DP5-201ENST00000525775 383 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC009268.1-201ENST00000561352 1203 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 ADAM3B-201ENST00000569937 840 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC103810.1-201ENST00000579873 453 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 BDH2P1-201ENST00000602288 736 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RNA5SP393-201ENST00000363423 117 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 Z86062.1-201ENST00000406773 777 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC107081.1-201ENST00000414975 361 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC244453.4-201ENST00000419150 388 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RPS15AP28-201ENST00000435088 386 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 ELOCP13-201ENST00000443934 329 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC011753.1-201ENST00000451001 220 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 OR52A4P-203ENST00000498233 1014 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
CCDC88CQ9P219 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC88CQ9P219 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 DEFB109C-201ENST00000382575 264 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 DEFB109B-201ENST00000382656 264 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 SNORA17.3-201ENST00000391159 129 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 SFR1P1-201ENST00000403720 688 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AL034418.1-201ENST00000448675 860 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AP004371.1-201ENST00000525240 214 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 MTND2P26-201ENST00000528255 1029 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 CBX3P2-202ENST00000583365 535 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 DUXAP4-201ENST00000603046 613 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AL138880.2-201ENST00000616214 239 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 AC068722.2-201ENST00000618734 544 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 MIR1291-201ENST00000627649 87 ntBASIC2.04□□□□□ -2.08
CCDC88CQ9P219 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC88CQ9P219 MIR504-201ENST00000385065 83 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AL079342.1-201ENST00000401460 267 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AL356057.2-201ENST00000403318 432 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC092447.6-201ENST00000414578 210 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 SSXP4-201ENST00000451349 245 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 TRBV26-201ENST00000456572 344 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 RPL30P9-201ENST00000465586 330 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC072039.1-201ENST00000477611 581 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 SNORA31.11-201ENST00000516528 139 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 HMGN1P28-201ENST00000521340 364 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AK6P1-201ENST00000540219 478 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 VN1R78P-201ENST00000597393 564 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC103710.1-201ENST00000610003 901 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms