Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 LINC00622-201ENST00000562811 1570 ntBASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 OR4G2P-202ENST00000641004 1759 ntBASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 AC010928.1-201ENST00000592477 1447 ntBASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
LIN7CQ9NUP9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 EXOC5P1-201ENST00000510543 1969 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RNU1-15P-201ENST00000353977 144 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 MIR448-201ENST00000362131 111 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RNU6-50P-201ENST00000362356 103 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 Y_RNA.372-201ENST00000365599 102 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 DEFB109C-201ENST00000382575 264 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 DEFB109B-201ENST00000382656 264 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RNU6-641P-201ENST00000384006 107 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RNU6-701P-201ENST00000384059 107 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 MIR181A1-201ENST00000385026 110 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 MIR514A1-201ENST00000385133 98 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RNA5SP397-201ENST00000391323 118 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RPS4XP9-201ENST00000405151 780 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 HSPE1P26-201ENST00000405341 275 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 NDUFS5P1-201ENST00000405668 289 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RN7SKP106-201ENST00000410832 272 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RN7SKP167-201ENST00000411047 285 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RN7SKP140-201ENST00000411196 284 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 MED13P1-201ENST00000428342 171 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RPS20P5-201ENST00000434808 360 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RPS15AP9-201ENST00000439856 381 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RPS29P22-201ENST00000472363 168 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 RN7SL432P-201ENST00000484057 298 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC025445.1-201ENST00000502728 300 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 SNORA70.16-201ENST00000516390 95 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 CDH12P4-201ENST00000517835 295 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 CDH12P3-201ENST00000517935 295 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 MTND4LP26-201ENST00000518144 282 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 CDH12P1-201ENST00000518435 295 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 IGLV3-26-201ENST00000520756 302 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 ZNF519P2-201ENST00000557032 169 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC105129.1-201ENST00000560250 297 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 CYP4A43P-201ENST00000568156 121 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC012507.3-201ENST00000603556 477 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 Z98200.1-201ENST00000607298 470 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 U4.5-201ENST00000617137 123 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC139792.3-201ENST00000623525 224 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 Z82217.1-201ENST00000625157 8149 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC018529.3-201ENST00000624212 2254 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 AC116096.1-201ENST00000566804 2314 ntBASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
LIN7CQ9NUP9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 AC079741.1-201ENST00000321498 212 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 OR4G2P-201ENST00000328113 903 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 AC073343.1-201ENST00000328239 651 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RNU6-74P-201ENST00000384235 107 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RNU6-780P-201ENST00000391030 104 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RPS16P5-201ENST00000406501 404 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RNU2-39P-201ENST00000410604 198 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RNU2-37P-201ENST00000410695 177 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RNA5SP104-201ENST00000410989 118 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 RPL37P18-201ENST00000411602 243 ntBASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.68□□□□□ -1.82
LIN7CQ9NUP9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms