Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU6-730P-201ENST00000383954 104 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 RNU6-878P-201ENST00000384578 110 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 RNU6-328P-201ENST00000390887 106 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 TPMTP3-201ENST00000411928 735 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 TPMTP2-201ENST00000414372 726 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 NPM1P11-201ENST00000417106 855 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC012065.2-201ENST00000421295 375 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AL035410.1-201ENST00000427409 427 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AL590399.6-201ENST00000446396 307 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 RPS4XP2-201ENST00000458402 793 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 MTND4LP3-201ENST00000468320 276 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 FCF1P3-201ENST00000496394 590 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 MTND5P13-201ENST00000513046 1079 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC022861.1-201ENST00000522981 663 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC008507.1-201ENST00000587506 734 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AL355812.1-201ENST00000603215 216 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC112187.2-201ENST00000604345 283 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC012360.2-201ENST00000609349 391 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC011939.3-201ENST00000613686 466 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AC097714.1-201ENST00000511272 1647 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 SNORA31-201ENST00000362607 130 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 RNU6-501P-201ENST00000364072 100 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 RNVU1-3-201ENST00000364313 161 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 SNORD82-201ENST00000365530 70 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 SNORA26.8-201ENST00000391306 124 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 DHFRP6-201ENST00000401776 268 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AL122016.1-201ENST00000403365 367 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 RPL7P8-201ENST00000411964 730 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 OFD1P18Y-201ENST00000420889 959 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 MTCO2P5-201ENST00000422621 426 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 RPL36AP33-201ENST00000450395 310 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 SUMO2P2-201ENST00000456482 255 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AP001992.1-205ENST00000462248 379 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AP001486.1-201ENST00000463339 476 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 SNRPGP3-201ENST00000469405 227 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AL049873.1-201ENST00000480540 376 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC106872.3-201ENST00000495104 446 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 OR5H5P-201ENST00000503164 928 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC110794.1-201ENST00000505816 425 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC024589.1-201ENST00000512207 263 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 APOOP4-201ENST00000513530 597 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AP005136.1-201ENST00000579765 429 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC025588.3-201ENST00000604182 274 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC073657.2-201ENST00000605661 303 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 HMGN2P28-201ENST00000606102 262 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AL158063.1-201ENST00000615349 536 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC090116.1-201ENST00000615679 446 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AC139792.2-201ENST00000624218 587 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AL031985.3-201ENST00000565390 2449 ntBASIC3.93□□□□□ -1.78
DDX4Q9NQI0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.93□□□□□ -1.78
DDX4Q9NQI0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms