Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 SFR1P1-201ENST00000403720 688 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 AC099677.1-201ENST00000420575 175 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 AL118520.1-201ENST00000450770 291 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 MTCO3P11-201ENST00000455103 774 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 RNF138P1-201ENST00000502765 546 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 RNU6-491P-201ENST00000516099 110 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 AC115989.2-201ENST00000578640 563 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 AC113194.1-201ENST00000606037 500 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 AC245517.5-201ENST00000611529 162 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 AC034102.8-201ENST00000615146 484 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 ZNF519P1-201ENST00000449011 1626 ntBASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KIAA1549Q9HCM3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 RPS6P14-201ENST00000425165 719 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 OR51B8P-201ENST00000449892 769 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 snoU13.3-201ENST00000459441 104 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC096992.1-201ENST00000459808 709 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 RPL21P39-201ENST00000463605 483 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 RPL21P99-201ENST00000480369 423 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC110792.2-201ENST00000510278 224 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 RANP3-201ENST00000530970 276 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AK6P1-201ENST00000540219 478 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC026464.5-201ENST00000562497 722 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AL590282.1-201ENST00000610379 1136 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AL390240.1-201ENST00000612950 384 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC123912.3-201ENST00000600907 1367 ntBASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
KIAA1549Q9HCM3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 AL591806.2-201ENST00000433122 173 ntBASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 YWHAZP8-201ENST00000436935 731 ntBASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 AL513321.1-201ENST00000441175 761 ntBASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 ARL4AP2-201ENST00000507378 601 ntBASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 AC116337.1-201ENST00000509680 687 ntBASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 AC010625.1-201ENST00000511296 403 ntBASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 SNRPGP16-201ENST00000533275 226 ntBASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.9□□□□□ -2.11
KIAA1549Q9HCM3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 SNORA14A-201ENST00000364773 135 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AC004866.2-201ENST00000438285 481 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AC011753.1-201ENST00000451001 220 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 SNORA31.11-201ENST00000516528 139 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 RNU6-1073P-201ENST00000517182 106 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AC138915.1-201ENST00000565427 1685 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 RNU6-819P-201ENST00000364116 107 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 RNA5SP88-201ENST00000365560 109 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 FNDC3CP-201ENST00000420795 1155 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 TPTE2P6-202ENST00000445572 1007 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 IFNA11P-201ENST00000446352 526 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 RPS29P12-201ENST00000460178 152 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 TRBV1-201ENST00000476502 284 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AC104435.1-201ENST00000483483 166 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AC008885.2-201ENST00000509506 930 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 HMGN1P28-201ENST00000521340 364 ntBASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.89□□□□□ -2.11
KIAA1549Q9HCM3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms