Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-199P-201ENST00000362954 107 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-899P-201ENST00000363947 107 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RN7SKP189-201ENST00000365042 330 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 GNG5P2-201ENST00000372054 207 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-178P-201ENST00000384631 104 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AL035079.1-201ENST00000405210 287 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AL391361.1-201ENST00000405580 489 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU2-68P-201ENST00000410878 191 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 OR2AM1P-201ENST00000422137 422 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 PTGES3P4-201ENST00000426243 356 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AL354707.3-201ENST00000427308 331 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AL590399.2-201ENST00000427536 309 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RPS15AP5-201ENST00000436276 388 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 TBCAP1-201ENST00000436520 327 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 Z82210.1-201ENST00000440037 231 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RPL23AP58-201ENST00000440453 469 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AL589765.3-201ENST00000446084 462 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC114728.1-201ENST00000488289 483 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RN7SL314P-201ENST00000490735 292 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 DUTP1-201ENST00000493631 470 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC008945.1-201ENST00000505144 499 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 MLLT10P2-201ENST00000506434 249 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AL390198.2-201ENST00000510553 222 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU4-57P-201ENST00000515980 135 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RN7SKP164-201ENST00000516138 266 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-58P-201ENST00000517143 103 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR4800-201ENST00000537353 80 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 CYCSP38-201ENST00000559840 322 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC009127.3-201ENST00000570531 403 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC091133.5-201ENST00000603088 301 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RPL12P48-201ENST00000605620 304 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC099669.2-201ENST00000616549 437 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 pRNA.9-201ENST00000618609 89 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC092628.2-201ENST00000622492 339 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC006453.3-201ENST00000635891 377 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 MAPK10-270ENST00000641102 3538 ntBASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-1Q9BYR8 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 VTRNA3-1P-201ENST00000362552 102 ntBASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 RNA5SP321-201ENST00000362722 111 ntBASIC3.25□□□□□ -1.89
KRTAP3-1Q9BYR8 SNORA63.4-201ENST00000362763 126 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms