Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC009961.2-201ENST00000435771 251 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 RPL35AP22-201ENST00000436855 335 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 KLF3P2-201ENST00000465138 268 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC078785.3-201ENST00000476607 425 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC114967.1-201ENST00000504890 259 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC109464.2-201ENST00000510242 943 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 Y_RNA.672-201ENST00000516289 104 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC008489.1-201ENST00000524271 483 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC025884.1-201ENST00000556034 378 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC137800.2-201ENST00000574375 120 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 MTND1P15-201ENST00000579262 949 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 MIR3690-201ENST00000580266 75 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AL161729.3-201ENST00000603533 673 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AL592436.1-201ENST00000605135 558 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC012443.1-201ENST00000605605 231 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 MIR432-201ENST00000606207 94 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 AC104073.3-201ENST00000610942 955 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCGF1Q9BSM1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 SPRR2C-201ENST00000290702 219 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RNU4-1-201ENST00000363925 141 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RNY4P34-201ENST00000364779 95 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RNU4-65P-201ENST00000410473 140 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 BTF3P10-201ENST00000433415 495 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 GAPDHP17-201ENST00000449858 1001 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RAD23BP3-201ENST00000454157 1152 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RNU7-59P-201ENST00000459101 61 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 FTH1P21-201ENST00000512179 511 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RNU2-58P-201ENST00000516403 183 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 RNU6-405P-201ENST00000516637 110 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 SNORA18.6-201ENST00000516792 115 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 SNORA31.22-201ENST00000517204 135 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC105233.3-201ENST00000531125 744 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 MIR3913-1-201ENST00000577744 102 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 KC877982.1-201ENST00000602313 470 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AP001330.4-201ENST00000604350 154 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AL139286.2-201ENST00000606838 396 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AL451064.1-201ENST00000607718 471 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC245517.5-201ENST00000611529 162 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC090970.3-201ENST00000612566 866 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AL589743.7-201ENST00000612637 233 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC093838.1-201ENST00000613014 469 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AL355810.1-201ENST00000614629 552 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC008121.2-201ENST00000614647 523 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AL139089.1-201ENST00000620372 975 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 AC112484.5-201ENST00000624189 228 ntBASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCGF1Q9BSM1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
PCGF1Q9BSM1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PCGF1Q9BSM1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PCGF1Q9BSM1 RNU6-173P-201ENST00000364215 104 ntBASIC3.46□□□□□ -1.86
PCGF1Q9BSM1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.46□□□□□ -1.86
PCGF1Q9BSM1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.46□□□□□ -1.86
PCGF1Q9BSM1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.46□□□□□ -1.86
PCGF1Q9BSM1 MTCO3P41-201ENST00000414801 328 ntBASIC3.46□□□□□ -1.86
PCGF1Q9BSM1 HMGB3P23-201ENST00000414981 585 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms