Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 VN1R10P-201ENST00000447106 875 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AL109933.2-201ENST00000452651 260 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 MTND2P39-201ENST00000457230 764 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
FOXC2Q99958 ST13P14-201ENST00000474095 734 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 RPL30P14-201ENST00000482744 348 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC093278.1-201ENST00000494700 600 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC114781.4-201ENST00000513707 639 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 AC107934.2-201ENST00000518653 310 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.62□□□□□ -1.99
FOXC2Q99958 FAM60DP-201ENST00000524174 632 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 DNAJC8P1-201ENST00000554535 372 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.62□□□□□ -1.99
FOXC2Q99958 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC138761.3-201ENST00000579993 334 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AP001521.1-201ENST00000609150 300 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 uc_338.25-201ENST00000613756 156 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 AL157770.1-201ENST00000623049 439 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 AC126544.2-201ENST00000625174 749 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.62□□□□□ -1.99
FOXC2Q99958 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
FOXC2Q99958 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
FOXC2Q99958 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
FOXC2Q99958 TAB3P1-202ENST00000452645 1634 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AP002907.1-201ENST00000606361 1430 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXC2Q99958 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
FOXC2Q99958 MIR22-201ENST00000362190 85 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 RNU6-236P-201ENST00000363886 106 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 SKINT1L-201ENST00000401057 817 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 RPL7P25-201ENST00000404151 721 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 RNA5SP229-201ENST00000410809 99 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AL137014.1-201ENST00000420490 1226 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AL645937.1-202ENST00000421799 937 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 RPL27AP8-201ENST00000424277 446 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC019097.1-201ENST00000424783 735 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AL359385.1-201ENST00000456509 365 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC091179.1-201ENST00000461606 579 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 RPS29P26-201ENST00000477483 171 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXC2Q99958 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXC2Q99958 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
FOXC2Q99958 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXC2Q99958 SNORA70.16-201ENST00000516390 95 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXC2Q99958 OR5AK1P-201ENST00000524837 922 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AP002770.2-201ENST00000543613 532 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AL845331.3-202ENST00000562856 261 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 HMGB1P6-201ENST00000569046 646 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC122134.1-202ENST00000569111 1201 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AC008507.1-201ENST00000587506 734 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 VN1R87P-201ENST00000596706 487 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AC106791.2-201ENST00000604680 391 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC099785.1-201ENST00000605697 437 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AL592148.2-201ENST00000612210 372 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXC2Q99958 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXC2Q99958 AC087821.2-201ENST00000637086 450 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
FOXC2Q99958 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
FOXC2Q99958 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXC2Q99958 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXC2Q99958 AC011460.1-201ENST00000636268 1834 ntBASIC2.61□□□□□ -1.99
FOXC2Q99958 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXC2Q99958 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXC2Q99958 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXC2Q99958 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.6□□□□□ -1.99
FOXC2Q99958 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXC2Q99958 AL672167.1-206ENST00000356293 943 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 RNU6-799P-201ENST00000363567 107 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 CD24P4-201ENST00000382840 243 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 MIR506-201ENST00000384998 124 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.6□□□□□ -1.99
FOXC2Q99958 LUZP4P1-201ENST00000415420 344 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC245291.1-201ENST00000419501 328 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms