Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC119751.6-201ENST00000416712 186 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC006466.1-201ENST00000438721 289 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 RPS11P7-201ENST00000442125 465 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC013470.1-201ENST00000453438 462 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 RN7SL72P-201ENST00000460697 269 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 COX6CP14-201ENST00000469580 174 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 RNU7-175P-201ENST00000515915 61 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 Y_RNA.706-201ENST00000516933 99 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 Y_RNA.710-201ENST00000516975 110 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC020658.2-201ENST00000559030 4020 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC136932.1-201ENST00000574771 208 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PHOX2BQ99453 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 CU639417.4-201ENST00000623928 207 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 AP001148.1-201ENST00000624124 2359 ntBASIC6.12□□□□□ -1.43
PHOX2BQ99453 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHOX2BQ99453 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PHOX2BQ99453 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.12□□□□□ -1.43
PHOX2BQ99453 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-37P-201ENST00000362692 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 U8.4-201ENST00000363626 134 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-11P-201ENST00000364234 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNA5SP500-201ENST00000364486 119 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-7-201ENST00000364784 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-8-201ENST00000365467 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 Y_RNA.358-201ENST00000365491 99 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-25P-201ENST00000383873 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-1-201ENST00000383898 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-36P-201ENST00000384172 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-4P-201ENST00000384205 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-5P-201ENST00000384238 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 SNORA36C-201ENST00000384289 132 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-3P-201ENST00000384314 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-16P-201ENST00000384385 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-15P-201ENST00000384534 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-1081P-201ENST00000384537 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-2-201ENST00000384627 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-29P-201ENST00000384637 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-9-201ENST00000384776 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 SNORA12.2-201ENST00000391040 156 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RPL35AP31-201ENST00000418340 337 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 RPS29P33-201ENST00000456717 146 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RPL7P49-201ENST00000471402 708 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 RN7SL97P-201ENST00000486780 299 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 AC072052.1-201ENST00000496556 306 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 CASP1P1-201ENST00000526345 212 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 MRPS36P4-201ENST00000534436 298 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 MZT1P2-201ENST00000604387 248 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 RNU6-6P-201ENST00000606623 107 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 AC141002.1-201ENST00000607025 279 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 AC007785.2-201ENST00000598627 1916 ntBASIC6.11□□□□□ -1.43
PHOX2BQ99453 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PHOX2BQ99453 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.11□□□□□ -1.43
PHOX2BQ99453 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.1□□□□□ -1.43
PHOX2BQ99453 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PHOX2BQ99453 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PHOX2BQ99453 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PHOX2BQ99453 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.1□□□□□ -1.43
PHOX2BQ99453 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC6.1□□□□□ -1.43
PHOX2BQ99453 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PHOX2BQ99453 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PHOX2BQ99453 SNORD50.1-201ENST00000362987 71 ntBASIC6.1□□□□□ -1.43
PHOX2BQ99453 Y_RNA.143-201ENST00000363520 106 ntBASIC6.1□□□□□ -1.43
PHOX2BQ99453 RNU6-827P-201ENST00000365553 106 ntBASIC6.1□□□□□ -1.43
PHOX2BQ99453 MIR765-201ENST00000390226 114 ntBASIC6.1□□□□□ -1.43
PHOX2BQ99453 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PHOX2BQ99453 RNU6-1140P-201ENST00000410517 106 ntBASIC6.1□□□□□ -1.43
PHOX2BQ99453 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.1□□□□□ -1.43
PHOX2BQ99453 AC007389.2-201ENST00000434630 306 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms