Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR4716-201ENST00000579628 84 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC004908.2-201ENST00000609090 574 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC087588.2-201ENST00000617667 426 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC009161.2-201ENST00000624626 138 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC009951.1-201ENST00000623674 2614 ntBASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP1Q96SZ6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU4-1-201ENST00000363925 141 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-115P-201ENST00000364310 107 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 MIR320B1-201ENST00000390209 79 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-1106P-201ENST00000390845 107 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 DHFRP6-201ENST00000401776 268 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AL136116.1-201ENST00000403591 381 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 RNA5SP498-201ENST00000411342 120 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC078974.1-201ENST00000411597 223 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC048351.1-201ENST00000420064 602 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC073069.1-201ENST00000428657 441 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AL138799.3-201ENST00000438968 350 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 RPL32P28-201ENST00000443577 397 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SL860P-201ENST00000473738 223 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC022861.1-201ENST00000522981 663 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC078899.5-201ENST00000612475 178 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC023509.5-201ENST00000617434 807 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 AC091925.1-201ENST00000623204 462 ntBASIC4.59□□□□□ -1.67
CDK5RAP1Q96SZ6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.68
CDK5RAP1Q96SZ6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDK5RAP1Q96SZ6 AL672167.1-205ENST00000641112 3080 ntBASIC4.59□□□□□ -1.68
CDK5RAP1Q96SZ6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CDK5RAP1Q96SZ6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.59□□□□□ -1.68
CDK5RAP1Q96SZ6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.59□□□□□ -1.68
CDK5RAP1Q96SZ6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AP002907.1-201ENST00000606361 1430 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-1120P-201ENST00000362988 108 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 SNORA20.2-201ENST00000383922 131 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-606P-201ENST00000384721 111 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 BTBD10P2-201ENST00000404779 676 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-272P-201ENST00000411028 104 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 CHIAP3-201ENST00000423668 1133 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 SRIP2-201ENST00000428470 166 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 RPL7P15-201ENST00000461190 712 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 HMGN2P26-201ENST00000463169 339 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC109327.1-201ENST00000471666 403 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 VN1R17P-201ENST00000472048 1090 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC026979.1-201ENST00000492525 396 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 TMEM251P1-201ENST00000503717 318 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 CCDC34P1-201ENST00000507441 517 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 RN7SKP122-201ENST00000515923 296 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-794P-201ENST00000517261 64 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms