Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC125611.1-201ENST00000549563 229 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 MIR5708-201ENST00000579723 85 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 BNIP3P24-201ENST00000593398 557 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AC096947.1-201ENST00000603233 470 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AL022099.1-201ENST00000604551 712 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AP002802.2-201ENST00000605877 235 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AC007275.1-201ENST00000621243 671 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AL356585.4-201ENST00000623078 1229 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AC109454.4-201ENST00000623411 649 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 Z99496.1-201ENST00000469424 1477 ntBASIC3.01□□□□□ -1.93
RPRD1AQ96P16 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.01□□□□□ -1.93
RPRD1AQ96P16 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
RPRD1AQ96P16 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
RPRD1AQ96P16 MIR506-201ENST00000384998 124 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 MIR493-201ENST00000385254 89 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 RPL21P3-201ENST00000395517 478 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 NDUFB4P4-201ENST00000404822 243 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 MIR1289-1-201ENST00000408836 144 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 USP9YP21-201ENST00000420603 432 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 AL139132.1-201ENST00000431587 344 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 AC004866.2-201ENST00000438285 481 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 MTCYBP42-201ENST00000444653 1130 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 RPS3AP14-201ENST00000483907 780 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3□□□□□ -1.93
RPRD1AQ96P16 RN7SKP43-201ENST00000516173 320 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3□□□□□ -1.93
RPRD1AQ96P16 FAM60DP-201ENST00000524174 632 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 SETP7-201ENST00000552169 453 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3□□□□□ -1.93
RPRD1AQ96P16 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RPRD1AQ96P16 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3□□□□□ -1.93
RPRD1AQ96P16 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3□□□□□ -1.93
RPRD1AQ96P16 AC012443.1-201ENST00000605605 231 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 AC124016.2-201ENST00000610058 665 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 AC069234.5-201ENST00000611056 416 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3□□□□□ -1.93
RPRD1AQ96P16 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RPRD1AQ96P16 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RPRD1AQ96P16 AP003122.5-201ENST00000527668 3766 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 MTND5P19-201ENST00000424872 1794 ntBASIC3□□□□□ -1.93
RPRD1AQ96P16 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AL513185.3-201ENST00000433335 1300 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AL035425.3-201ENST00000564206 4996 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AL450338.1-201ENST00000407987 512 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 RNU2-47P-201ENST00000410649 186 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC069282.1-201ENST00000411911 526 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 BMS1P22-201ENST00000414726 313 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 OR4K6P-201ENST00000416478 897 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 SSXP9-201ENST00000417503 292 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC091390.3-201ENST00000426478 338 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 EZH2P1-201ENST00000431167 291 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 RPS20P5-201ENST00000434808 360 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 RPL23AP58-201ENST00000440453 469 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 OR6K5P-201ENST00000447050 945 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AL359385.1-201ENST00000456509 365 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AP005205.1-201ENST00000563503 508 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC126365.2-201ENST00000580630 379 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC006386.2-201ENST00000624491 75 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC009039.2-201ENST00000624524 529 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC012005.1-201ENST00000624575 75 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 AC233263.6-201ENST00000631132 1963 ntBASIC2.99□□□□□ -1.93
RPRD1AQ96P16 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
RPRD1AQ96P16 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RPRD1AQ96P16 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.98□□□□□ -1.93
RPRD1AQ96P16 ANKRD36P1-201ENST00000344424 659 ntBASIC2.98□□□□□ -1.93
RPRD1AQ96P16 Y_RNA.25-201ENST00000362528 102 ntBASIC2.98□□□□□ -1.93
RPRD1AQ96P16 RNU6-173P-201ENST00000364215 104 ntBASIC2.98□□□□□ -1.93
RPRD1AQ96P16 SNORA1.3-201ENST00000384676 136 ntBASIC2.98□□□□□ -1.93
RPRD1AQ96P16 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RPRD1AQ96P16 SNRPEP2-201ENST00000397592 279 ntBASIC2.98□□□□□ -1.93
RPRD1AQ96P16 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.98□□□□□ -1.93
RPRD1AQ96P16 AL137014.1-201ENST00000420490 1226 ntBASIC2.98□□□□□ -1.93
RPRD1AQ96P16 COTL1P1-201ENST00000422309 375 ntBASIC2.98□□□□□ -1.93
RPRD1AQ96P16 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms