Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RNA5SP108-201ENST00000605921 117 ntBASIC4.32□□□□□ -1.72
SNX27Q96L92 AC090425.2-201ENST00000608818 501 ntBASIC4.32□□□□□ -1.72
SNX27Q96L92 AC104073.3-201ENST00000610942 955 ntBASIC4.32□□□□□ -1.72
SNX27Q96L92 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNX27Q96L92 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.32□□□□□ -1.72
SNX27Q96L92 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX27Q96L92 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX27Q96L92 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX27Q96L92 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX27Q96L92 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX27Q96L92 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 RNU6-213P-201ENST00000384051 104 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 SNORA40.3-201ENST00000390964 122 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 HMGN1P14-201ENST00000412459 517 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC007899.1-201ENST00000412776 775 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 ISCA1P6-201ENST00000427740 390 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AL121890.1-201ENST00000435457 205 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX27Q96L92 RPL22P17-201ENST00000438729 315 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 snoU13.3-201ENST00000459441 104 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 HMGB1P25-201ENST00000468402 607 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 ST13P14-201ENST00000474095 734 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AC017037.1-201ENST00000508460 471 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 RNU6-1003P-201ENST00000517099 105 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 RNA5SP179-201ENST00000517284 121 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 IGKV2D-23-201ENST00000518179 286 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX27Q96L92 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX27Q96L92 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX27Q96L92 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 BNIP3P8-201ENST00000597863 560 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC112191.3-201ENST00000604371 277 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC091167.4-201ENST00000605079 184 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AC009159.1-201ENST00000618386 642 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AC018755.4-201ENST00000619715 454 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AL603839.4-201ENST00000624658 1005 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX27Q96L92 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX27Q96L92 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 AC092125.1-201ENST00000562568 1995 ntBASIC4.31□□□□□ -1.72
SNX27Q96L92 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SNX27Q96L92 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 U3.15-201ENST00000365398 212 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 Y_RNA.466-201ENST00000384294 113 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 RNU6-1119P-201ENST00000384349 108 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 SNORA57.3-201ENST00000411095 141 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AC092447.6-201ENST00000414578 210 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX27Q96L92 USP9YP13-201ENST00000417797 480 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 ZNF885P-201ENST00000420174 1098 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 MRPS18BP2-201ENST00000434310 759 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX27Q96L92 MTND1P27-201ENST00000451117 902 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 RN7SL271P-201ENST00000487601 295 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AC025554.1-201ENST00000505641 188 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX27Q96L92 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX27Q96L92 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX27Q96L92 AC022878.1-201ENST00000530684 149 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX27Q96L92 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.3□□□□□ -1.72
SNX27Q96L92 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX27Q96L92 HMGN2P28-201ENST00000606102 262 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AL590099.1-201ENST00000615276 138 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 AC110801.1-201ENST00000623590 212 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX27Q96L92 AC018555.1-201ENST00000567548 1980 ntBASIC4.3□□□□□ -1.72
SNX27Q96L92 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX27Q96L92 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SNX27Q96L92 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX27Q96L92 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNX27Q96L92 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX27Q96L92 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.29□□□□□ -1.72
SNX27Q96L92 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.29□□□□□ -1.72
SNX27Q96L92 Y_RNA.40-201ENST00000362645 93 ntBASIC4.29□□□□□ -1.72
SNX27Q96L92 RNA5SP267-201ENST00000364893 126 ntBASIC4.29□□□□□ -1.72
SNX27Q96L92 RNU6-359P-201ENST00000365466 108 ntBASIC4.29□□□□□ -1.72
SNX27Q96L92 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SNX27Q96L92 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms