Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 OR51A3P-201ENST00000413596 924 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 BX664727.1-201ENST00000416024 466 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 NPM1P11-201ENST00000417106 855 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 RPP40P1-201ENST00000426762 456 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 RPL17P35-201ENST00000432217 549 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 RPL21P23-201ENST00000446654 460 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC106707.2-201ENST00000484182 374 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 LSM6P2-201ENST00000552208 177 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AL355836.1-201ENST00000555951 870 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AGGF1P5-201ENST00000567900 919 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC133794.1-201ENST00000602731 914 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC040168.1-201ENST00000623594 991 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC111188.2-201ENST00000529697 1387 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 AC010329.5-201ENST00000623497 2174 ntBASIC3.1□□□□□ -1.91
PKNOX2Q96KN3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 ZNF849P-201ENST00000594711 1566 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC009237.2-201ENST00000421358 284 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC092573.2-201ENST00000434546 243 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 DPPA3P1-201ENST00000448050 469 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 CDC42P1-201ENST00000456658 548 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC008155.2-201ENST00000464337 397 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC091959.2-201ENST00000477363 321 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC068587.1-201ENST00000483613 781 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC022493.1-201ENST00000492984 337 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC023141.11-201ENST00000508864 202 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 MRPS36P2-201ENST00000512569 299 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 HMGB1P1-201ENST00000522557 636 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 BPTFP1-201ENST00000579209 492 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 MIR4448-201ENST00000584360 86 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC078899.2-201ENST00000595282 212 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AL020997.3-201ENST00000602843 359 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 AC105227.2-201ENST00000615075 605 ntBASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PKNOX2Q96KN3 TAB3P1-202ENST00000452645 1634 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 RNU4-52P-201ENST00000384209 138 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 MIR181A2-201ENST00000384863 110 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 SNORA57.1-201ENST00000391227 145 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AL445529.1-201ENST00000398713 389 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 RNA5SP120-201ENST00000410900 112 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC246680.2-201ENST00000422106 389 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC233981.1-201ENST00000423224 461 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 HSPD1P21-201ENST00000436541 245 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AL359073.1-201ENST00000448036 403 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC008379.1-201ENST00000463655 464 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC117522.3-201ENST00000507974 584 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 PRELID3BP5-201ENST00000508612 460 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 PAICSP4-201ENST00000517543 1253 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 PRELID3BP8-201ENST00000604148 295 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC138932.5-201ENST00000617759 563 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC073592.7-201ENST00000623659 507 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 AC073308.1-201ENST00000623696 305 ntBASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PKNOX2Q96KN3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX2Q96KN3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.07□□□□□ -1.92
PKNOX2Q96KN3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX2Q96KN3 AC130650.2-201ENST00000618736 2403 ntBASIC3.07□□□□□ -1.92
PKNOX2Q96KN3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms