Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RPL21P66-201ENST00000426566 466 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 MTATP6P11-201ENST00000428071 670 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 SRIP2-201ENST00000428470 166 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP47Q96K76 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.2□□□□□ -1.9
USP47Q96K76 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.2□□□□□ -1.9
USP47Q96K76 RNU6-991P-201ENST00000516168 107 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
USP47Q96K76 SYF2P1-201ENST00000550658 413 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.2□□□□□ -1.9
USP47Q96K76 AL020997.3-201ENST00000602843 359 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 AC113368.1-201ENST00000603736 382 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.2□□□□□ -1.9
USP47Q96K76 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP47Q96K76 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP47Q96K76 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP47Q96K76 AL353746.1-201ENST00000566293 6881 ntBASIC3.2□□□□□ -1.9
USP47Q96K76 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP47Q96K76 AL355578.1-201ENST00000607405 1328 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP47Q96K76 RPL21P132-201ENST00000331267 462 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.19□□□□□ -1.9
USP47Q96K76 Y_RNA.493-201ENST00000384422 102 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 RNU6-253P-201ENST00000384730 105 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP47Q96K76 RPP40P1-201ENST00000426762 456 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 AC096638.1-201ENST00000444678 216 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 RPL7P55-201ENST00000450522 746 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 AL353718.1-201ENST00000451028 517 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.19□□□□□ -1.9
USP47Q96K76 MTCYBP20-201ENST00000524239 1129 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 AP004371.1-201ENST00000525240 214 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.19□□□□□ -1.9
USP47Q96K76 AC124293.1-201ENST00000530034 493 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 OR4R2P-201ENST00000530815 597 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 RANP3-201ENST00000530970 276 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.19□□□□□ -1.9
USP47Q96K76 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 AC009163.5-201ENST00000575421 637 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP47Q96K76 AC090425.2-201ENST00000608818 501 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
USP47Q96K76 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.19□□□□□ -1.9
USP47Q96K76 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP47Q96K76 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
USP47Q96K76 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP47Q96K76 SNORD114-1-201ENST00000362705 72 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 RNU1-138P-201ENST00000384093 164 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP47Q96K76 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.18□□□□□ -1.9
USP47Q96K76 AL137014.1-201ENST00000420490 1226 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AC246680.2-201ENST00000422106 389 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.18□□□□□ -1.9
USP47Q96K76 AC096632.1-201ENST00000427395 310 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AL590103.1-201ENST00000434488 307 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.18□□□□□ -1.9
USP47Q96K76 ELOCP13-201ENST00000443934 329 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.18□□□□□ -1.9
USP47Q96K76 HMGN3P1-201ENST00000453847 193 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 RPL30P9-201ENST00000465586 330 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 MTCO3P44-201ENST00000510977 541 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 ATP5F1P5-201ENST00000526403 760 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AC109635.4-202ENST00000531666 412 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.18□□□□□ -1.9
USP47Q96K76 AC079148.1-201ENST00000565944 819 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AP004247.3-201ENST00000608682 624 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.18□□□□□ -1.9
USP47Q96K76 PISRT1-201ENST00000626175 531 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP47Q96K76 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP47Q96K76 ZNF734P-201ENST00000419494 1534 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 AP001350.1-201ENST00000601906 1524 ntBASIC3.18□□□□□ -1.9
USP47Q96K76 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
USP47Q96K76 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.18□□□□□ -1.9
USP47Q96K76 AC073055.1-201ENST00000456901 1621 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
USP47Q96K76 SNORD65C-201ENST00000390962 71 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 SFR1P1-201ENST00000403720 688 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 AL024474.1-201ENST00000404655 591 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 HMGB1P11-201ENST00000413899 637 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 MTND4P15-201ENST00000437913 1033 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 HMGB1P12-201ENST00000438594 598 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.17□□□□□ -1.9
USP47Q96K76 HMGN2P16-201ENST00000456802 261 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 RPL21P99-201ENST00000480369 423 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 RPL23AP49-201ENST00000492925 468 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.17□□□□□ -1.9
USP47Q96K76 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.17□□□□□ -1.9
USP47Q96K76 OR8K4P-201ENST00000534608 872 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.17□□□□□ -1.9
USP47Q96K76 AC010198.2-201ENST00000550612 259 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 AC025588.3-201ENST00000604182 274 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms