Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.72□□□□□ -1.33
MS4A4AQ96JQ5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
MS4A4AQ96JQ5 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
MS4A4AQ96JQ5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
MS4A4AQ96JQ5 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
MS4A4AQ96JQ5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
MS4A4AQ96JQ5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AL445487.1-201ENST00000415694 1580 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 Y_RNA.217-201ENST00000364214 105 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 Y_RNA.218-201ENST00000364218 104 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 Y_RNA.238-201ENST00000364441 102 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 RNU1-139P-201ENST00000391307 165 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 RNA5SP56-201ENST00000410277 118 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 RNU6-1025P-201ENST00000410629 104 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 RPL37P18-201ENST00000411602 243 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 SEPT7P4-201ENST00000437076 306 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC023141.8-201ENST00000442554 208 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC009296.1-201ENST00000443146 155 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 Y_RNA.641-201ENST00000459414 105 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 RPSAP50-201ENST00000481955 852 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC012158.1-204ENST00000483430 465 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 CYCTP-201ENST00000504253 315 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC074255.1-201ENST00000511259 501 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 SNORA40.9-201ENST00000515895 93 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC055872.1-201ENST00000570978 278 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC005520.5-201ENST00000613926 164 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 AC132068.1-201ENST00000623805 459 ntBASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.71□□□□□ -1.34
MS4A4AQ96JQ5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RNU1-24P-201ENST00000364285 165 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RNU6-76P-201ENST00000384060 104 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RNU6-239P-201ENST00000390990 99 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RN7SKP213-201ENST00000410746 298 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AL158156.1-201ENST00000422509 473 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AL663074.2-201ENST00000440621 479 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AC108161.1-201ENST00000461060 402 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RN7SL189P-201ENST00000468631 289 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AC026254.2-201ENST00000475295 371 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AC093840.1-201ENST00000511599 336 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RNU6-377P-201ENST00000515965 102 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 RNU6-1114P-201ENST00000516022 107 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 MRPS21P7-201ENST00000566937 238 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AL670379.2-201ENST00000604983 252 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 AC116447.1-201ENST00000613153 453 ntBASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.7□□□□□ -1.34
MS4A4AQ96JQ5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
MS4A4AQ96JQ5 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms