Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.97□□□□□ -1.61
RTF1Q92541 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RTF1Q92541 RNU6-28P-201ENST00000362378 107 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 Y_RNA.46-201ENST00000362695 102 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 Y_RNA.256-201ENST00000364594 104 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 SNORA73.2-201ENST00000364946 201 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 Y_RNA.372-201ENST00000365599 102 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 RNU6-1103P-201ENST00000384150 107 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 RNA5SP171-201ENST00000391071 115 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 BX295541.1-201ENST00000417774 250 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 AC012065.2-201ENST00000421295 375 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RTF1Q92541 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RTF1Q92541 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 AC010342.1-201ENST00000514047 877 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 RNA5SP143-201ENST00000516936 115 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 AP001893.2-201ENST00000526949 202 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.97□□□□□ -1.61
RTF1Q92541 CENPUP2-201ENST00000555897 1186 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 HNRNPCP4-201ENST00000571636 900 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 AC006504.3-201ENST00000586818 523 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 AC011468.4-201ENST00000603942 409 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 AC004067.1-201ENST00000608733 700 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.97□□□□□ -1.61
RTF1Q92541 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RTF1Q92541 AL356489.2-201ENST00000566968 3528 ntBASIC4.97□□□□□ -1.61
RTF1Q92541 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RTF1Q92541 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RTF1Q92541 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RTF1Q92541 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.97□□□□□ -1.61
RTF1Q92541 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.96□□□□□ -1.61
RTF1Q92541 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RTF1Q92541 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.96□□□□□ -1.61
RTF1Q92541 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTF1Q92541 IPO8P1-201ENST00000455509 3109 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 RNU5E-4P-201ENST00000364931 120 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 RNU6-730P-201ENST00000383954 104 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 SNORD3H-201ENST00000384486 214 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 RNU6-878P-201ENST00000384578 110 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 RNU6-146P-201ENST00000384602 108 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AL590002.1-201ENST00000406554 418 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 RNU2-8P-201ENST00000410727 190 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 RPL31P2-201ENST00000413849 377 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AL035423.1-201ENST00000420331 213 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 AL353777.1-201ENST00000425552 326 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AL589872.1-201ENST00000426602 288 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.96□□□□□ -1.62
RTF1Q92541 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.96□□□□□ -1.62
RTF1Q92541 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 PLGLA-201ENST00000465668 449 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AC019235.1-201ENST00000503847 207 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 ARL2BPP6-201ENST00000512757 439 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AC010493.1-201ENST00000513479 292 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.96□□□□□ -1.62
RTF1Q92541 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 MIR4716-201ENST00000579628 84 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.96□□□□□ -1.62
RTF1Q92541 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.96□□□□□ -1.62
RTF1Q92541 AC104458.1-201ENST00000608243 463 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 AL590282.1-201ENST00000610379 1136 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTF1Q92541 MIR6075-201ENST00000620782 95 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 UBE3AP2-201ENST00000429033 2259 ntBASIC4.96□□□□□ -1.62
RTF1Q92541 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.96□□□□□ -1.62
RTF1Q92541 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTF1Q92541 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTF1Q92541 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTF1Q92541 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RTF1Q92541 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 FRG1BP-201ENST00000278882 761 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 RNU6-853P-201ENST00000364306 107 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.95□□□□□ -1.62
RTF1Q92541 SNORA5A-201ENST00000384111 134 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 RPL31P1-201ENST00000398116 372 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 RAP1BP3-201ENST00000407180 549 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 RNU4-55P-201ENST00000410731 137 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.95□□□□□ -1.62
RTF1Q92541 RPL31P45-201ENST00000419532 356 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 MTCYBP24-201ENST00000420387 1106 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.95□□□□□ -1.62
RTF1Q92541 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.95□□□□□ -1.62
RTF1Q92541 USP9YP36-201ENST00000424581 829 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 ISCA1P6-201ENST00000427740 390 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 DPPA2P1-201ENST00000428060 556 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AL590233.1-201ENST00000430017 456 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms