Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 GVINP1-202ENST00000531871 7271 ntBASIC5.79□□□□□ -1.48
NEDD1Q8NHV4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 ZNF72P-201ENST00000425869 1908 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 SDAD1P1-202ENST00000524156 2051 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 RNU6-48P-201ENST00000384161 107 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 RNU6-729P-201ENST00000384399 107 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL031679.1-201ENST00000400616 525 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL357515.1-201ENST00000402967 542 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 RNU6-735P-201ENST00000410612 107 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 RNU6-55P-201ENST00000411092 107 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL139156.1-201ENST00000412785 841 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AC068533.1-201ENST00000418542 415 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 RPL21P133-201ENST00000443666 476 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL031584.1-201ENST00000447169 754 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AC243772.1-201ENST00000451620 410 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 TRBVB-201ENST00000477100 408 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AC108860.1-201ENST00000484521 383 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 MTCO1P24-201ENST00000515438 1558 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL671862.1-201ENST00000515851 349 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 CDH12P4-201ENST00000517835 295 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 CDH12P3-201ENST00000517935 295 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 CDH12P1-201ENST00000518435 295 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AC011494.1-201ENST00000596454 237 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 AL391358.1-201ENST00000605342 190 ntBASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD1Q8NHV4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 RNA5SP191-201ENST00000362585 102 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 SNORA73.1-201ENST00000363107 205 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 Y_RNA.170-201ENST00000363746 110 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 RNVU1-6-201ENST00000364688 164 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 OR52E6-202ENST00000379946 954 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 MIR613-201ENST00000385248 95 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 RPL21P67-201ENST00000402896 478 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 MIR548H3-201ENST00000408771 118 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 RNU2-33P-201ENST00000410344 192 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 RNU2-20P-201ENST00000410425 191 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 TBCAP2-201ENST00000416175 326 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC233981.1-201ENST00000423224 461 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 MED13P1-201ENST00000428342 171 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC004383.1-201ENST00000438135 289 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC099799.1-201ENST00000439809 192 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AL138752.1-201ENST00000452964 351 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AURKAPS2-201ENST00000454983 333 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 IGKV2D-10-201ENST00000520194 281 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AL049839.1-201ENST00000556151 657 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 MIR3667-201ENST00000581025 74 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 SNORD39.3-201ENST00000584451 71 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AL512782.1-201ENST00000603093 364 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AL022394.1-201ENST00000606979 292 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC019206.1-201ENST00000621938 425 ntBASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.77□□□□□ -1.49
NEDD1Q8NHV4 AC002525.1-201ENST00000624392 1622 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms