Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.215-201ENST00000364204 112 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.218-201ENST00000364218 104 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AC019155.1-201ENST00000382242 574 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 RNU6-449P-201ENST00000383914 107 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AL033519.2-201ENST00000403958 392 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 U3.36-201ENST00000408418 213 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 U3.42-201ENST00000408746 214 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 RNU6-387P-201ENST00000411331 105 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 RNU2-6P-201ENST00000411404 190 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 RPL37P18-201ENST00000411602 243 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AC007098.1-201ENST00000420122 367 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 RPS12P5-201ENST00000423449 371 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AC073069.1-201ENST00000428657 441 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 GSTM5P1-201ENST00000434751 660 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 KRT8P51-201ENST00000438938 274 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 HMGN3P1-201ENST00000453847 193 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AC005229.2-201ENST00000456995 399 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.686-201ENST00000516548 134 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 IGKV2-36-201ENST00000519999 223 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AP001784.1-201ENST00000624107 428 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 CYP4F35P-202ENST00000636121 390 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 AC112255.1-201ENST00000624070 2493 ntBASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.69□□□□□ -1.5
NPAS3Q8IXF0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.580-201ENST00000391004 95 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL139039.1-201ENST00000401900 692 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 HMGN1P24-201ENST00000412282 298 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 RAB28P5-201ENST00000427490 651 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 CALM2P2-201ENST00000428512 440 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 TBCAP1-201ENST00000436520 327 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 RPS4XP20-201ENST00000505751 772 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC005798.1-201ENST00000513715 387 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 RNU6-488P-201ENST00000515918 99 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 RNU6-685P-201ENST00000517088 95 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 SYF2P1-201ENST00000550658 413 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL162424.1-201ENST00000602325 221 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL670379.6-201ENST00000603753 252 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL670379.1-201ENST00000604752 252 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL670379.2-201ENST00000604983 252 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL670379.5-201ENST00000605253 252 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL670379.8-201ENST00000605353 252 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL670379.7-201ENST00000605823 252 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL133481.2-203ENST00000607558 139 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC241377.1-201ENST00000619797 406 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC074101.1-201ENST00000637861 241 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AL138713.1-201ENST00000624026 2130 ntBASIC5.68□□□□□ -1.5
NPAS3Q8IXF0 AC083837.1-201ENST00000565297 2994 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 Y_RNA.71-201ENST00000362892 104 ntBASIC5.67□□□□□ -1.5
NPAS3Q8IXF0 RNA5SP326-201ENST00000363209 110 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms