Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC010738.1-201ENST00000604970 987 ntBASIC3□□□□□ -1.93
CCDC50Q8IVM0 CYCSP41-201ENST00000616920 296 ntBASIC3□□□□□ -1.93
CCDC50Q8IVM0 AL138955.1-201ENST00000622881 1040 ntBASIC3□□□□□ -1.93
CCDC50Q8IVM0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC50Q8IVM0 AC004777.1-201ENST00000624317 287 ntBASIC3□□□□□ -1.93
CCDC50Q8IVM0 AP000720.1-201ENST00000625091 483 ntBASIC3□□□□□ -1.93
CCDC50Q8IVM0 AL138960.2-201ENST00000625145 535 ntBASIC3□□□□□ -1.93
CCDC50Q8IVM0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3□□□□□ -1.93
CCDC50Q8IVM0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3□□□□□ -1.93
CCDC50Q8IVM0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 Y_RNA.25-201ENST00000362528 102 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 RNU5D-1-201ENST00000363299 116 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 RNU6-224P-201ENST00000384055 107 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 RPS3AP26-201ENST00000398259 784 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 CYCSP45-201ENST00000402289 315 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 RNU4-65P-201ENST00000410473 140 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AL449283.1-202ENST00000418249 604 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 GTF2IP7-202ENST00000436677 309 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AL671855.1-201ENST00000446875 1203 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 Z82190.1-201ENST00000454534 490 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AL049829.1-201ENST00000465411 156 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC125611.1-201ENST00000549563 229 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AL606834.3-201ENST00000602615 496 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AL356575.1-201ENST00000603008 283 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 BNIP3P31-201ENST00000604515 566 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC073387.2-201ENST00000604797 784 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC012468.1-201ENST00000604888 430 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 RPL23AP88-201ENST00000605759 454 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC090115.4-201ENST00000609970 188 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 VIS1.1-201ENST00000610517 203 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC109454.4-201ENST00000623411 649 ntBASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC50Q8IVM0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 snoZ40.1-201ENST00000364540 72 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 OR4K6P-201ENST00000416478 897 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 RPL39P6-201ENST00000448289 150 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC104982.1-201ENST00000478775 574 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 KLRA1P-201ENST00000503499 986 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 TBCAP3-201ENST00000512475 312 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 RN7SKP31-201ENST00000516354 278 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC087808.1-201ENST00000520501 361 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 MED28P6-201ENST00000558776 231 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC006539.2-201ENST00000601729 572 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AL022067.1-201ENST00000602426 454 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC096947.1-201ENST00000603233 470 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AL022099.1-201ENST00000604551 712 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC024060.1-201ENST00000607052 494 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 RNU6-1192P-201ENST00000612197 107 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 SNHG22-203ENST00000617833 660 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 RNU6-489P-201ENST00000618289 107 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC084824.4-201ENST00000620106 731 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC006111.3-201ENST00000622137 383 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 ZNF807-201ENST00000328088 1707 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 AC000403.1-201ENST00000613696 3585 ntBASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC50Q8IVM0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 CD24P4-201ENST00000382840 243 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 RNU6-878P-201ENST00000384578 110 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 RNU6-1257P-201ENST00000384625 110 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 RNU6-1000P-201ENST00000391066 106 ntBASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC50Q8IVM0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms