Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AL133153.1-201ENST00000557756 303 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 DISC2.1-201ENST00000612827 205 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.49□□□□□ -1.53
USP48Q86UV5 U73479.1-201ENST00000618062 168 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AL136221.1-201ENST00000621449 509 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AC024614.3-201ENST00000637860 256 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP48Q86UV5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP48Q86UV5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP48Q86UV5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 EOGT-210ENST00000615922 1931 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.48□□□□□ -1.53
USP48Q86UV5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
USP48Q86UV5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.48□□□□□ -1.53
USP48Q86UV5 MIR372-201ENST00000362225 67 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 SNORA62.3-201ENST00000365110 153 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RNU6-116P-201ENST00000384042 109 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RNU6-606P-201ENST00000384721 111 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 MIR153-1-201ENST00000384914 90 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RNU6-516P-201ENST00000411381 104 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.48□□□□□ -1.53
USP48Q86UV5 EIF1P3-201ENST00000423841 334 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RPL35AP22-201ENST00000436855 335 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RPL23AP33-201ENST00000442301 452 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 AC010655.1-201ENST00000449336 292 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.48□□□□□ -1.53
USP48Q86UV5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.48□□□□□ -1.53
USP48Q86UV5 AL356010.1-201ENST00000456364 102 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.48□□□□□ -1.53
USP48Q86UV5 SCARNA10-201ENST00000459255 330 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 HMGN1P10-201ENST00000474557 553 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RN7SL132P-201ENST00000478131 296 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 AC025164.1-201ENST00000496249 478 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 AC068305.1-201ENST00000497406 726 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 HSPD1P15-201ENST00000505573 1122 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RNU2-10P-201ENST00000516375 211 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.48□□□□□ -1.53
USP48Q86UV5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.48□□□□□ -1.53
USP48Q86UV5 AC015917.1-201ENST00000579654 510 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 AC024220.1-201ENST00000603675 484 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 RMST_3.1-201ENST00000611651 109 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 AC006504.8-201ENST00000621046 635 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 AC112200.1-201ENST00000625015 234 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 MTND1P37-201ENST00000636562 264 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.48□□□□□ -1.53
USP48Q86UV5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
USP48Q86UV5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP48Q86UV5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP48Q86UV5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
USP48Q86UV5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP48Q86UV5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP48Q86UV5 HSPE1P11-201ENST00000339579 310 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 RNU6-263P-201ENST00000363811 107 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 RNU1-132P-201ENST00000364300 164 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 Y_RNA.263-201ENST00000364659 114 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 RNA5SP283-201ENST00000365604 119 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 RNU6-39P-201ENST00000384344 107 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.47□□□□□ -1.53
USP48Q86UV5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.47□□□□□ -1.53
USP48Q86UV5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.47□□□□□ -1.53
USP48Q86UV5 Z74021.1-201ENST00000423610 407 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.47□□□□□ -1.53
USP48Q86UV5 AL358232.1-201ENST00000448030 501 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.47□□□□□ -1.53
USP48Q86UV5 AC114797.1-201ENST00000514003 728 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 SCARNA15.1-201ENST00000516384 125 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 HMGN1P28-201ENST00000521340 364 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.47□□□□□ -1.53
USP48Q86UV5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.47□□□□□ -1.53
USP48Q86UV5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.47□□□□□ -1.53
USP48Q86UV5 MIR4458-201ENST00000578872 75 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 AC005261.5-201ENST00000596280 355 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.47□□□□□ -1.53
USP48Q86UV5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.47□□□□□ -1.53
USP48Q86UV5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP48Q86UV5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP48Q86UV5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
USP48Q86UV5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP48Q86UV5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.47□□□□□ -1.53
USP48Q86UV5 AC125257.1-201ENST00000560400 2930 ntBASIC5.47□□□□□ -1.53
USP48Q86UV5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.47□□□□□ -1.53
USP48Q86UV5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
USP48Q86UV5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
USP48Q86UV5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
USP48Q86UV5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
USP48Q86UV5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms