Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.170-201ENST00000363746 110 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 RNA5SP500-201ENST00000364486 119 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 MIR517A-201ENST00000385001 87 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 RNA5SP107-201ENST00000411358 122 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 RPS4XP5-201ENST00000419038 768 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AC073465.2-201ENST00000440938 498 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AC104073.1-201ENST00000451988 151 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AL139099.1-201ENST00000497398 403 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 HMGB1P21-201ENST00000502313 581 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 RNA5SP464-201ENST00000516251 108 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 HMGN2P36-201ENST00000529541 409 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 PSMA6P4-201ENST00000603247 718 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AC108738.1-201ENST00000603703 237 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 HSPA8P1-201ENST00000425843 1833 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 RBPJP2-201ENST00000618187 1444 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC092681.1-201ENST00000297369 291 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RNU6-960P-201ENST00000364056 120 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RNU6-1078P-201ENST00000364522 103 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RNU6-715P-201ENST00000365204 103 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RPL21P67-201ENST00000402896 478 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 MIR1298-201ENST00000408783 112 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 SYF2P2-201ENST00000417620 583 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC099677.3-201ENST00000427081 395 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 CFL1P1-202ENST00000432948 411 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC087385.1-201ENST00000475062 312 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RN7SL799P-201ENST00000475891 298 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC093767.1-201ENST00000504523 156 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RN7SKP82-201ENST00000516786 223 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RNU6-1092P-201ENST00000516955 87 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 HMGN1P28-201ENST00000521340 364 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AP006587.4-201ENST00000526053 529 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RANP3-201ENST00000530970 276 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 CBX3P4-201ENST00000538909 354 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC122688.1-201ENST00000541494 223 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC002044.1-201ENST00000606707 158 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RN7SL544P-201ENST00000617232 284 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 RN7SL763P-201ENST00000620922 284 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 AC103710.2-202ENST00000641454 2853 ntBASIC5.65□□□□□ -1.5
FOXR1Q6PIV2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
FOXR1Q6PIV2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
FOXR1Q6PIV2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FOXR1Q6PIV2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
FOXR1Q6PIV2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
FOXR1Q6PIV2 AC006600.2-201ENST00000624834 2506 ntBASIC5.65□□□□□ -1.51
FOXR1Q6PIV2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
FOXR1Q6PIV2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 AL450345.1-202ENST00000605741 3881 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 AC005183.1-201ENST00000603687 1979 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 STX3-208ENST00000641815 3236 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 OR4F13P-202ENST00000560066 2054 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 AL391987.6-201ENST00000305671 199 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 RNU6-682P-201ENST00000363843 106 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 RNU6-704P-201ENST00000364162 103 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 RNU4-50P-201ENST00000364361 141 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 RNU6-708P-201ENST00000384217 107 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 RPS4XP7-201ENST00000406274 780 ntBASIC5.64□□□□□ -1.51
FOXR1Q6PIV2 RNA5SP487-201ENST00000410186 122 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms