Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AL445487.1-201ENST00000415694 1580 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AC105074.1-201ENST00000623380 3095 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 AP001029.2-203ENST00000589795 4910 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 CPHL1P-201ENST00000461341 3407 ntBASIC4.9□□□□□ -1.63
CNKSR3Q6P9H4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 OR1S2-201ENST00000302592 978 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-984P-201ENST00000363236 109 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-744P-201ENST00000365557 107 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-1316P-201ENST00000384242 108 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AL359634.1-202ENST00000404721 284 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 PPIAP31-201ENST00000405422 495 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-628P-201ENST00000410675 107 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC114482.1-201ENST00000418010 247 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AL132765.1-201ENST00000434165 553 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC119618.1-201ENST00000434191 222 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC004938.1-201ENST00000438468 308 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 Z98949.2-201ENST00000440996 144 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 HSPE1P28-201ENST00000443139 211 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AL137792.2-201ENST00000443484 235 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 RPS26P56-201ENST00000444468 240 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC026410.2-201ENST00000460281 156 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 RN7SL283P-201ENST00000489055 303 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC106872.2-201ENST00000494303 480 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 FAM206BP-201ENST00000510179 541 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC093303.1-201ENST00000514549 295 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 OR4T1P-201ENST00000554933 911 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AL022345.1-201ENST00000607292 135 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 U6.101-201ENST00000637707 76 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 ASNSP1-201ENST00000518311 1939 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AC092125.1-201ENST00000562568 1995 ntBASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNKSR3Q6P9H4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AC008079.2-201ENST00000623543 20396 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 RNY4P16-201ENST00000364768 94 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 MT-TG-201ENST00000387429 68 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 CISD1P1-201ENST00000393907 327 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 RPL30P3-201ENST00000424262 333 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AC006548.1-201ENST00000427470 102 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AL138799.3-201ENST00000438968 350 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AL049734.2-201ENST00000441066 616 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 RPS20P32-201ENST00000456044 356 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 Y_RNA.635-201ENST00000459041 101 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 RN7SL604P-201ENST00000492589 296 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 MTCO1P29-201ENST00000496868 288 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AC017037.2-201ENST00000513850 890 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 APOOP3-201ENST00000536787 586 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 TRAV8-5-201ENST00000537369 341 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 MIR4504-201ENST00000577413 92 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AC098848.2-201ENST00000588023 330 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AP001029.3-201ENST00000588063 596 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 NUTF2P8-201ENST00000604593 363 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 CR381572.1-201ENST00000625098 102 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 Z95331.1-201ENST00000623075 23112 ntBASIC4.88□□□□□ -1.63
CNKSR3Q6P9H4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms