Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.9□□□□□ -1.94
CD47Q08722 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.9□□□□□ -1.94
CD47Q08722 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.9□□□□□ -1.94
CD47Q08722 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 RNU6-433P-201ENST00000363216 104 ntBASIC2.9□□□□□ -1.95
CD47Q08722 MIR490-201ENST00000384865 128 ntBASIC2.9□□□□□ -1.95
CD47Q08722 MIR181B1-201ENST00000385240 110 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC119751.3-201ENST00000399720 670 ntBASIC2.9□□□□□ -1.95
CD47Q08722 CYCSP45-201ENST00000402289 315 ntBASIC2.9□□□□□ -1.95
CD47Q08722 RNA5SP344-201ENST00000411081 104 ntBASIC2.9□□□□□ -1.95
CD47Q08722 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.9□□□□□ -1.95
CD47Q08722 HMGB1P12-201ENST00000438594 598 ntBASIC2.9□□□□□ -1.95
CD47Q08722 Z95327.1-201ENST00000446082 482 ntBASIC2.9□□□□□ -1.95
CD47Q08722 ARPC3P2-201ENST00000457786 533 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AP001992.1-205ENST00000462248 379 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC004263.1-201ENST00000479327 332 ntBASIC2.9□□□□□ -1.95
CD47Q08722 HMGB1P36-201ENST00000487709 576 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC023424.2-201ENST00000493479 777 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC006499.5-201ENST00000505037 514 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 LTV1P1-201ENST00000510683 1237 ntBASIC2.9□□□□□ -1.95
CD47Q08722 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.9□□□□□ -1.95
CD47Q08722 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CD47Q08722 MTCYBP43-201ENST00000513621 740 ntBASIC2.9□□□□□ -1.95
CD47Q08722 SNORA3.4-201ENST00000515969 96 ntBASIC2.9□□□□□ -1.95
CD47Q08722 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.9□□□□□ -1.95
CD47Q08722 HSPA8P13-201ENST00000523715 472 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AP003461.1-201ENST00000528866 78 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.9□□□□□ -1.95
CD47Q08722 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 HIGD1AP1-201ENST00000550979 275 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC126177.3-201ENST00000551839 688 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AL163153.1-201ENST00000554223 283 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.9□□□□□ -1.95
CD47Q08722 AC090616.5-202ENST00000582111 297 ntBASIC2.9□□□□□ -1.95
CD47Q08722 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.9□□□□□ -1.95
CD47Q08722 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.9□□□□□ -1.95
CD47Q08722 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.9□□□□□ -1.95
CD47Q08722 AC006539.2-201ENST00000601729 572 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AL390208.1-201ENST00000605885 644 ntBASIC2.9□□□□□ -1.95
CD47Q08722 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CD47Q08722 AP000676.3-201ENST00000623299 569 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC079228.1-201ENST00000624774 1049 ntBASIC2.9□□□□□ -1.95
CD47Q08722 AC103706.2-201ENST00000638080 240 ntBASIC2.9□□□□□ -1.95
CD47Q08722 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CD47Q08722 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CD47Q08722 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
CD47Q08722 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CD47Q08722 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.9□□□□□ -1.95
CD47Q08722 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD47Q08722 AC007256.1-201ENST00000392253 2765 ntBASIC2.89□□□□□ -1.95
CD47Q08722 MTCO1P12-201ENST00000414273 1543 ntBASIC2.89□□□□□ -1.95
CD47Q08722 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD47Q08722 RNU6-289P-201ENST00000364093 107 ntBASIC2.89□□□□□ -1.95
CD47Q08722 MIR607-201ENST00000385241 96 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AL022400.1-201ENST00000423946 935 ntBASIC2.89□□□□□ -1.95
CD47Q08722 MTATP6P17-201ENST00000431030 672 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.89□□□□□ -1.95
CD47Q08722 AC005019.1-201ENST00000436455 431 ntBASIC2.89□□□□□ -1.95
CD47Q08722 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.89□□□□□ -1.95
CD47Q08722 MTND5P14-201ENST00000441481 1267 ntBASIC2.89□□□□□ -1.95
CD47Q08722 MEMO1P3-201ENST00000459811 302 ntBASIC2.89□□□□□ -1.95
CD47Q08722 RPL7P5-201ENST00000471472 736 ntBASIC2.89□□□□□ -1.95
CD47Q08722 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD47Q08722 RPS4XP13-201ENST00000483219 789 ntBASIC2.89□□□□□ -1.95
CD47Q08722 HMGB1P22-201ENST00000505315 124 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.89□□□□□ -1.95
CD47Q08722 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.89□□□□□ -1.95
CD47Q08722 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.89□□□□□ -1.95
CD47Q08722 AC022861.1-201ENST00000522981 663 ntBASIC2.89□□□□□ -1.95
CD47Q08722 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD47Q08722 ELOCP32-201ENST00000548625 324 ntBASIC2.89□□□□□ -1.95
CD47Q08722 EEF1B2P4-201ENST00000551398 348 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.89□□□□□ -1.95
CD47Q08722 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.89□□□□□ -1.95
CD47Q08722 AC087481.2-201ENST00000565492 330 ntBASIC2.89□□□□□ -1.95
CD47Q08722 MIR4474-201ENST00000579189 78 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.89□□□□□ -1.95
CD47Q08722 AC073657.2-201ENST00000605661 303 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AC024560.3-201ENST00000608482 349 ntBASIC2.89□□□□□ -1.95
CD47Q08722 MIR6798-201ENST00000612887 67 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AC006133.1-201ENST00000617106 264 ntBASIC2.89□□□□□ -1.95
CD47Q08722 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AC131159.1-201ENST00000621854 213 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.89□□□□□ -1.95
CD47Q08722 AC019226.2-201ENST00000625973 424 ntBASIC2.89□□□□□ -1.95
CD47Q08722 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms