Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 DNAJC19P8-201ENST00000452887 259 ntBASIC2.24□□□□□ -2.05
LSM6P62312 PNPLA4P1-201ENST00000458328 305 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AC087588.1-201ENST00000462203 316 ntBASIC2.24□□□□□ -2.05
LSM6P62312 MRPL42P6-201ENST00000486397 371 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AC135721.1-201ENST00000497954 479 ntBASIC2.24□□□□□ -2.05
LSM6P62312 RPS27P27-201ENST00000498779 255 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM6P62312 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM6P62312 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM6P62312 RNU6-1095P-201ENST00000516148 108 ntBASIC2.24□□□□□ -2.05
LSM6P62312 SNORA31.18-201ENST00000517043 134 ntBASIC2.24□□□□□ -2.05
LSM6P62312 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.24□□□□□ -2.05
LSM6P62312 AC010546.1-201ENST00000569391 485 ntBASIC2.24□□□□□ -2.05
LSM6P62312 OR1M4P-201ENST00000589199 287 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
LSM6P62312 VN1R88P-201ENST00000596787 292 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AC002487.1-201ENST00000604565 994 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AP006248.3-201ENST00000623580 594 ntBASIC2.24□□□□□ -2.05
LSM6P62312 AC092608.2-201ENST00000624427 218 ntBASIC2.24□□□□□ -2.05
LSM6P62312 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
LSM6P62312 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.24□□□□□ -2.05
LSM6P62312 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.24□□□□□ -2.05
LSM6P62312 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LSM6P62312 CR848007.1-201ENST00000442354 1699 ntBASIC2.24□□□□□ -2.05
LSM6P62312 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LSM6P62312 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LSM6P62312 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.23□□□□□ -2.05
LSM6P62312 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LSM6P62312 RNA5SP456-201ENST00000364002 114 ntBASIC2.23□□□□□ -2.05
LSM6P62312 MIR483-201ENST00000385070 76 ntBASIC2.23□□□□□ -2.05
LSM6P62312 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
LSM6P62312 MIR767-201ENST00000390228 109 ntBASIC2.23□□□□□ -2.05
LSM6P62312 RNU6-1197P-201ENST00000391183 107 ntBASIC2.23□□□□□ -2.05
LSM6P62312 AL513475.1-201ENST00000406602 315 ntBASIC2.23□□□□□ -2.05
LSM6P62312 HMGB3P31-201ENST00000413333 595 ntBASIC2.23□□□□□ -2.05
LSM6P62312 PAICSP7-201ENST00000419829 962 ntBASIC2.23□□□□□ -2.05
LSM6P62312 AL358075.3-201ENST00000426289 226 ntBASIC2.23□□□□□ -2.05
LSM6P62312 RPP40P1-201ENST00000426762 456 ntBASIC2.23□□□□□ -2.05
LSM6P62312 RPL23AP83-201ENST00000434984 473 ntBASIC2.23□□□□□ -2.05
LSM6P62312 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.23□□□□□ -2.05
LSM6P62312 TRBV26-201ENST00000456572 344 ntBASIC2.23□□□□□ -2.05
LSM6P62312 VN1R104P-201ENST00000505115 1009 ntBASIC2.23□□□□□ -2.05
LSM6P62312 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.23□□□□□ -2.05
LSM6P62312 AC026801.2-201ENST00000515352 425 ntBASIC2.23□□□□□ -2.05
LSM6P62312 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM6P62312 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM6P62312 ACTR3BP3-201ENST00000565577 979 ntBASIC2.23□□□□□ -2.05
LSM6P62312 LARP7P3-201ENST00000579888 337 ntBASIC2.23□□□□□ -2.05
LSM6P62312 MIR3616-201ENST00000584070 92 ntBASIC2.23□□□□□ -2.05
LSM6P62312 BNIP3P22-201ENST00000593399 556 ntBASIC2.23□□□□□ -2.05
LSM6P62312 VN1R92P-201ENST00000598511 928 ntBASIC2.23□□□□□ -2.05
LSM6P62312 MIR7106-201ENST00000612419 65 ntBASIC2.23□□□□□ -2.05
LSM6P62312 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.23□□□□□ -2.05
LSM6P62312 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.23□□□□□ -2.05
LSM6P62312 AL590396.2-201ENST00000636511 1041 ntBASIC2.23□□□□□ -2.05
LSM6P62312 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
LSM6P62312 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM6P62312 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM6P62312 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LSM6P62312 RNU6-461P-201ENST00000364195 107 ntBASIC2.22□□□□□ -2.05
LSM6P62312 SNORA80E-201ENST00000384744 137 ntBASIC2.22□□□□□ -2.05
LSM6P62312 MIR27B-201ENST00000385129 97 ntBASIC2.22□□□□□ -2.05
LSM6P62312 MIR1290-201ENST00000408735 78 ntBASIC2.22□□□□□ -2.05
LSM6P62312 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.22□□□□□ -2.05
LSM6P62312 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM6P62312 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.22□□□□□ -2.05
LSM6P62312 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM6P62312 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.22□□□□□ -2.05
LSM6P62312 AC009296.1-201ENST00000443146 155 ntBASIC2.22□□□□□ -2.05
LSM6P62312 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.22□□□□□ -2.05
LSM6P62312 AL135752.1-201ENST00000479477 471 ntBASIC2.22□□□□□ -2.05
LSM6P62312 AC087808.1-201ENST00000520501 361 ntBASIC2.22□□□□□ -2.05
LSM6P62312 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.22□□□□□ -2.05
LSM6P62312 SUB1P1-201ENST00000524415 382 ntBASIC2.22□□□□□ -2.05
LSM6P62312 COX6CP5-201ENST00000527162 228 ntBASIC2.22□□□□□ -2.05
LSM6P62312 OR4P1P-201ENST00000530808 1136 ntBASIC2.22□□□□□ -2.05
LSM6P62312 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.22□□□□□ -2.05
LSM6P62312 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.22□□□□□ -2.05
LSM6P62312 HMGB1P6-201ENST00000569046 646 ntBASIC2.22□□□□□ -2.05
LSM6P62312 AL356280.1-201ENST00000603614 379 ntBASIC2.22□□□□□ -2.05
LSM6P62312 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
LSM6P62312 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM6P62312 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LSM6P62312 AL022578.1-201ENST00000439330 1433 ntBASIC2.22□□□□□ -2.05
LSM6P62312 MTCO1P18-201ENST00000455518 1419 ntBASIC2.22□□□□□ -2.05
LSM6P62312 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LSM6P62312 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LSM6P62312 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.05
LSM6P62312 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
LSM6P62312 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.05
LSM6P62312 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LSM6P62312 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LSM6P62312 MIR34A-201ENST00000385130 110 ntBASIC2.21□□□□□ -2.06
LSM6P62312 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LSM6P62312 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.21□□□□□ -2.06
LSM6P62312 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.21□□□□□ -2.06
LSM6P62312 AL139039.1-201ENST00000401900 692 ntBASIC2.21□□□□□ -2.06
LSM6P62312 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.21□□□□□ -2.06
LSM6P62312 Z75741.2-201ENST00000417272 1167 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms