Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.13□□□□□ -1.75
CLRN1P58418 AC233279.1-201ENST00000455300 423 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AL445433.1-201ENST00000457507 257 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.13□□□□□ -1.75
CLRN1P58418 snoU13.3-201ENST00000459441 104 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 RNU6-329P-201ENST00000459618 107 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC006967.1-201ENST00000467608 589 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.13□□□□□ -1.75
CLRN1P58418 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.13□□□□□ -1.75
CLRN1P58418 MTCO3P9-201ENST00000506989 781 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 Y_RNA.665-201ENST00000516177 98 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 RNU6-277P-201ENST00000516272 106 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.13□□□□□ -1.75
CLRN1P58418 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.13□□□□□ -1.75
CLRN1P58418 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.13□□□□□ -1.75
CLRN1P58418 AL110118.1-201ENST00000553543 400 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.13□□□□□ -1.75
CLRN1P58418 NCAPGP2-201ENST00000557911 754 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC015912.2-201ENST00000571053 181 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 MIR4458-201ENST00000578872 75 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC091042.1-201ENST00000579213 173 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 MIR4436B2-201ENST00000581415 91 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 MIR4436B1-201ENST00000583272 91 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 MIR4424-201ENST00000585257 86 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC064836.2-201ENST00000609491 462 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 TUG1_2.1-201ENST00000614234 87 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC131238.1-201ENST00000617135 328 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 U73479.1-201ENST00000618062 168 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC025034.2-201ENST00000623264 286 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC055839.1-201ENST00000634467 498 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CLRN1P58418 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CLRN1P58418 AC083843.3-201ENST00000623679 2186 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 DDX18P3-201ENST00000404856 2007 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CLRN1P58418 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CLRN1P58418 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 Y_RNA.67-201ENST00000362870 100 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 RNU6-1249P-201ENST00000363237 111 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 RNU6-1284P-201ENST00000363701 100 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 RNU6-960P-201ENST00000364056 120 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 RNU6-61P-201ENST00000365528 109 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 Y_RNA.373-201ENST00000365600 103 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 UBE2V1P2-201ENST00000397758 440 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 OR6C66P-201ENST00000414917 930 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.12□□□□□ -1.75
CLRN1P58418 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.12□□□□□ -1.75
CLRN1P58418 AL137014.1-201ENST00000420490 1226 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.12□□□□□ -1.75
CLRN1P58418 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.12□□□□□ -1.75
CLRN1P58418 RPL36AP6-201ENST00000435770 321 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.12□□□□□ -1.75
CLRN1P58418 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.12□□□□□ -1.75
CLRN1P58418 RPL23AP43-201ENST00000446445 471 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 RNU7-180P-201ENST00000459240 63 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AC091885.1-201ENST00000506658 268 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 RNU6-1095P-201ENST00000516148 108 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AC008694.2-201ENST00000517591 306 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.12□□□□□ -1.75
CLRN1P58418 RPL7P20-201ENST00000520308 745 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AC100870.1-201ENST00000522035 505 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.12□□□□□ -1.75
CLRN1P58418 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.12□□□□□ -1.75
CLRN1P58418 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLRN1P58418 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.12□□□□□ -1.75
CLRN1P58418 AC051619.2-201ENST00000559063 397 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AC026464.5-201ENST00000562497 722 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 MIR4737-201ENST00000583979 81 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AC091178.1-203ENST00000584586 279 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 HMGB2P1-201ENST00000591146 634 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.12□□□□□ -1.75
CLRN1P58418 AP001486.3-201ENST00000615334 372 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.12□□□□□ -1.75
CLRN1P58418 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.12□□□□□ -1.75
CLRN1P58418 U3.53-201ENST00000628922 216 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AL391684.1-202ENST00000641293 1636 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 GABPAP-201ENST00000419271 1356 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLRN1P58418 FAM91A3P-201ENST00000456826 2544 ntBASIC4.12□□□□□ -1.75
CLRN1P58418 AP004289.2-201ENST00000444413 1457 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms