Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC026634.1-201ENST00000634369 198 ntBASIC3.27□□□□□ -1.89
HMGCS2P54868 MKKS-204ENST00000639674 192 ntBASIC3.27□□□□□ -1.89
HMGCS2P54868 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS2P54868 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS2P54868 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS2P54868 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS2P54868 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGCS2P54868 ZNF37BP-203ENST00000452306 1352 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AP003122.5-201ENST00000527668 3766 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGCS2P54868 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HMGCS2P54868 RNU6-492P-201ENST00000363035 104 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGCS2P54868 RNU6-1181P-201ENST00000384191 106 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 RNU6-837P-201ENST00000391056 108 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 RPL23AP47-201ENST00000408017 460 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 RNU2-42P-201ENST00000410697 113 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 RNU2-71P-201ENST00000411395 189 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 RPS3AP9-201ENST00000417027 792 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 MRPS36P1-201ENST00000421291 307 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC241584.1-201ENST00000438469 1241 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGCS2P54868 EEF1B2P7-201ENST00000451177 676 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 HMGN3P1-201ENST00000453847 193 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGCS2P54868 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGCS2P54868 VN1R17P-201ENST00000472048 1090 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC108734.3-201ENST00000481241 1165 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 BOLA3P3-201ENST00000505182 232 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC118282.1-201ENST00000506408 765 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.26□□□□□ -1.89
HMGCS2P54868 RNU6-1225P-201ENST00000516336 65 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 RNU6-1231P-201ENST00000517185 103 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC023538.1-201ENST00000534576 736 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC005832.3-201ENST00000537929 631 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AL132657.2-201ENST00000564417 358 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC074051.3-201ENST00000570238 358 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 OR4G1P-201ENST00000588632 938 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC025588.2-201ENST00000604851 466 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 Z99289.3-201ENST00000605586 594 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC091946.2-201ENST00000606105 291 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGCS2P54868 AP002791.1-201ENST00000623291 381 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AP000676.4-201ENST00000624659 623 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 AC243829.7-201ENST00000633081 225 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
HMGCS2P54868 AC116096.1-201ENST00000566804 2314 ntBASIC3.26□□□□□ -1.89
HMGCS2P54868 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HMGCS2P54868 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HMGCS2P54868 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGCS2P54868 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HMGCS2P54868 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGCS2P54868 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HMGCS2P54868 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HMGCS2P54868 RNU5D-1-201ENST00000363299 116 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGCS2P54868 MIR9-1-201ENST00000385198 89 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 TMSB4XP8-201ENST00000402089 135 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 SSXP10-201ENST00000402595 565 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AC068533.2-201ENST00000411872 306 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 TMSB4XP6-201ENST00000415187 135 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGCS2P54868 MRPL50P2-201ENST00000416821 482 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGCS2P54868 HMGB1P49-201ENST00000418882 569 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AC245291.1-201ENST00000419501 328 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 TMSB4XP1-201ENST00000424567 135 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 USP9YP11-201ENST00000427537 717 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGCS2P54868 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGCS2P54868 TXNP1-201ENST00000441872 371 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AL591719.1-201ENST00000444669 744 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 NECAP1P2-201ENST00000455668 727 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 RPL23AP55-201ENST00000498163 452 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
HMGCS2P54868 MTCYBP37-201ENST00000510642 1133 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGCS2P54868 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGCS2P54868 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.25□□□□□ -1.89
HMGCS2P54868 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGCS2P54868 AC023050.2-201ENST00000544968 387 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AC091544.4-201ENST00000555268 342 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGCS2P54868 AC234778.2-201ENST00000566241 354 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AC138915.2-201ENST00000569776 97 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGCS2P54868 DUXAP3-201ENST00000603616 594 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AC080013.3-201ENST00000606839 578 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AL355493.4-201ENST00000618530 292 ntBASIC3.25□□□□□ -1.89
HMGCS2P54868 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HMGCS2P54868 U6.98-201ENST00000637157 84 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms